New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | 4625493 = | 49 (0.840) | 4 (0.070) | 3/94 | NT | 9.7% | coding (1209/1224 nt) | deoB | phosphopentomutase |
? | W3110S.gb | 4625517 = | 29 (0.540) | intergenic (+9/‑48) | deoB/deoD | phosphopentomutase/purine‑nucleoside phosphorylase |
TTGTTTTATCCTTTTTGTGACATAACAAAGGCGGAGTCAACGCTCCGCCCAAATCCATCAGAACATGGCTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4625565‑4625493 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAACAATGGCTACCCCACACATTAA > W3110S.gb/4625517‑4625584 TTGTTTTATCCTTTTTGTGACATAACAAAGGCGGAGTCAACGCTCCGCCCAAATCCATCAGAACATGGCTT > 1:877916/1‑71 TGTTTTAACCTTTTTGTGACATAACAAAGGCGGAGTCAACGCTCCGCCCAAATCCATCAGAACATGGCTTT > 1:709688/1‑71 GTTTTATCCTTTTTGTGACATAACAAAGGCGGAGTCAACGCTCCGCCCAAATCCATCAGAACATGGCTTTG > 1:952520/1‑71 CCAAATCCATCAGAACATGGCTTTGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAA > 1:1193673/1‑71 CAAATCCATCAGAACATGGCTTTGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAA > 1:1348936/1‑61 CAAATCCATCAGAACATGGCTTTGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAA > 1:2673561/1‑61 ATCAGAACATGGCTTTGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAACAATGGC > 1:3060452/1‑70 TTGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAACAATGGCTACCCCACACATTAA > 1:4435142/1‑71 TGGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAACAATGGCTACCCCACACATTAA < 1:1075431/70‑1 TTGTTTTATCCTTTTTGTGACATAACAAAGGCGGAGTCAACGCTCCGCCCAAATCCATCAGAACATGGCTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4625565‑4625493 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgGGCGGAGCGTTGACTCCGCCTTTGTTATGTCACAAAAAGGATAAAACAATGGCTACCCCACACATTAA > W3110S.gb/4625517‑4625584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |