| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 637964 | 76 (1.300) | 4 (0.080) | 3/92 | NT | 5.7% | intergenic (‑168/‑204) | dsbG/ahpC | periplasmic disulfide isomerase/thiol‑disulphide oxidase/alkyl hydroperoxide reductase, C22 subunit |
| ? | W3110S.gb | = 637979 | 64 (1.210) | intergenic (‑183/‑189) | dsbG/ahpC | periplasmic disulfide isomerase/thiol‑disulphide oxidase/alkyl hydroperoxide reductase, C22 subunit | |||||
Only 100 of 135 total aligned reads displayed.
TGAGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCTGG > W3110S.gb/637894‑638034 | tGAGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAA < 1:105704‑M1/71‑1 (MQ=255)tGAGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAA < 1:5058735‑M1/71‑1 (MQ=255) aGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAg < 1:2027241/70‑1 (MQ=255) aGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGa < 1:521146/71‑1 (MQ=255) ggTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGAt < 1:3817063/70‑1 (MQ=255) ttgtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCa < 1:2560571/70‑1 (MQ=255) ttgtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCa < 1:4488667/70‑1 (MQ=255) ttgtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAA > 1:1085043‑M1/1‑63 (MQ=255) gtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCaaa < 1:848786/70‑1 (MQ=255) gtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCaaa < 1:4313160/70‑1 (MQ=255) gtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAg > 1:834787/1‑71 (MQ=255) gtAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAg > 1:2338470/1‑71 (MQ=255) tAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAgg > 1:5255282/1‑71 (MQ=255) tAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAg < 1:386796/70‑1 (MQ=255) aaTCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAggg > 1:2610884/1‑71 (MQ=255) aaTCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAggg > 1:5270988/1‑71 (MQ=255) ccATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAg > 1:3004146/1‑71 (MQ=255) tGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGa > 1:583233/1‑55 (MQ=255) tGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGtt < 1:1311856‑M2/70‑3 (MQ=255) gTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGtt < 1:3334128‑M2/69‑3 (MQ=255) tCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAg > 1:3515988/1‑61 (MQ=255) tCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGttcag > 1:1872842‑M2/1‑66 (MQ=255) tCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGtt < 1:2874169‑M2/68‑3 (MQ=255) gttgttGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAt > 1:4333226/1‑71 (MQ=255) gttgttGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAt > 1:468463/1‑71 (MQ=255) gttgttGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAt > 1:2298188/1‑71 (MQ=255) gttgttGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAt > 1:1019376/1‑71 (MQ=255) ttgttgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTa > 1:266495/1‑62 (MQ=255) gtgttgcATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGtt > 1:3799831‑M2/2‑63 (MQ=255) tgttgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTa > 1:933381/1‑71 (MQ=255) ttgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTac < 1:1013330/70‑1 (MQ=255) ttgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTac < 1:3350171/70‑1 (MQ=255) tgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCaaa > 1:629379/1‑53 (MQ=255) tgCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTa > 1:3459072/1‑68 (MQ=255) cATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAt > 1:3380969/1‑64 (MQ=255) cATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACgg < 1:4002635/71‑1 (MQ=255) cATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACgg < 1:5175150/71‑1 (MQ=255) tttGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAActaccctttggtatcttcagt > 1:4225901‑M1/1‑40 (MQ=255) tttGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTc < 1:126055/71‑1 (MQ=255) ttGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCa > 1:3949820/1‑71 (MQ=255) ttGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCa > 1:2447918/1‑71 (MQ=255) gTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGttc > 1:615964‑M2/1‑52 (MQ=255) gTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCAcc > 1:5066231/1‑71 (MQ=255) aaGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCaaa > 1:3419778/1‑44 (MQ=255) aGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGAtt < 1:3286791/57‑1 (MQ=255) gggCAACACCTCAGCCTGCAGGCAGGCACTGAAGTTACCAAAGGGTAGTTCAGATTACACGGTCACCTGGa < 1:1186844/71‑1 (MQ=255) ggCAACACCTCAGCCTGCAGGCAGGCACTGAActaccctttggtatct < 1:3943686‑M1/48‑17 (MQ=255) ggCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACgg < 1:553496/61‑1 (MQ=255) ggCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACgg < 1:4046814/61‑1 (MQ=255) ggCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGa > 1:3851869/1‑70 (MQ=255) ggCAACACCTCAGCCTGCAGGCAGGAACTGCAGATACCAAAGGGTAGTTCAGATTac > 1:4164677/1‑57 (MQ=255) gCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCAcc < 1:638633/65‑1 (MQ=255) gCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGa > 1:4980828/1‑69 (MQ=255) cAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAg < 1:4225561/71‑1 (MQ=255) aaCACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAgg > 1:2838527/1‑71 (MQ=255) acacCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCATATTACACGGTCACCTGGAAAggg < 1:2609057/71‑1 (MQ=255) acacCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAggg < 1:4392688/71‑1 (MQ=255) cacCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAggg > 1:1931289/1‑39 (MQ=255) cacCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGt > 1:1051668/1‑57 (MQ=255) cacCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCAc < 1:94411/60‑1 (MQ=255) ccTCAGCCTGCAGGCAGGCACTGATGATACCAAAGGGTAGTTCAGATTTCACg < 1:1975718/53‑1 (MQ=255) ccTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGc < 1:4914825/71‑1 (MQ=255) cTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGttca > 1:4459325‑M2/1‑39 (MQ=255) cAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAg < 1:4341318/63‑1 (MQ=255) cAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCAt > 1:5108704/1‑71 (MQ=255) cAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCAt > 1:2566196/1‑71 (MQ=255) tGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCa > 1:2201808/1‑49 (MQ=255) tGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTAc > 1:1969286/1‑71 (MQ=255) gcaggcagGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACt > 1:4623603/1‑71 (MQ=255) gcaggcagGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACt > 1:3553992/1‑71 (MQ=255) caggcaggCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACtt > 1:424867/1‑71 (MQ=255) caggcaggAACTGAAGATACCAAAGGGTAGTTCAGATTACACCGTCACCTGGaaa > 1:2557567/1‑55 (MQ=255) gcaggcaCTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTgca < 1:48785/50‑3 (MQ=255) caggcaCTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTa < 1:856848/71‑1 (MQ=255) aCTGAAGATACCAAAGGGTAGttcagtgcctgcctgcaggctgaggtgttgcccttacaaa > 1:637487‑M2/1‑21 (MQ=255) cTGAActaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacga > 1:2171602‑M1/1‑5 (MQ=255) cTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATcgccg > 1:3672656/1‑71 (MQ=255) cTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATcgccg > 1:426292/1‑71 (MQ=255) tGAActaccctttggtatcttcagtgcctgcctgcaggctgag > 1:4459325‑M1/1‑4 (MQ=255) tGAAGATACAAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACt > 1:3851231/1‑59 (MQ=255) gAActaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttac > 1:3532501‑M1/1‑3 (MQ=255) gAActaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttac > 1:615964‑M1/1‑3 (MQ=255) gAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGaaa > 1:1348727/1‑43 (MQ=255) gAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCAtttt > 1:3215278/1‑55 (MQ=255) gAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCt > 1:2195820/1‑71 (MQ=255) gAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCt > 1:2375535/1‑71 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacac > 1:3799831‑M1/1‑2 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacgaca < 1:1041094‑M1/70‑69 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacgaca < 1:814687‑M1/70‑69 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacgac < 1:3334128‑M1/69‑68 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacga < 1:2874169‑M1/68‑67 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacga < 1:3689550‑M1/68‑67 (MQ=255) aactaccctttggtatcttcagtgcctgcctgcaggctgaggtgttcccttacaaatgcaacaacgacatg > 1:5271829‑M1/1‑2 (MQ=255) aaGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCt < 1:2344219/70‑1 (MQ=255) aaGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCt < 1:2399057/70‑1 (MQ=255) aaGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCTg > 1:1522096/1‑71 (MQ=255) actaccctttggtatcttcagtgcctgcctgcaggctgaggtgttgcccttacaaatgcaacaacgacatg < 1:4308566‑M1/71‑71 (MQ=255) aGATACCAAAGGGTAGttcagtgcctgcctgcaggctgaggtgttgcc < 1:3943686‑M2/48‑33 (MQ=255) aGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTAc < 1:576048/55‑1 (MQ=255) aGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCTgg < 1:1267353/71‑1 (MQ=255) | TGAGGGTGTTGTAATCCATGTCGTTGTTGCATTTGTAAGGGCAACACCTCAGCCTGCAGGCAGGCACTGAAGATACCAAAGGGTAGTTCAGATTACACGGTCACCTGGAAAGGGGGCCATTTTACTTTTTATCGCCGCTGG > W3110S.gb/637894‑638034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |