| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1383523 = | 33 (0.560) | 3 (0.060) | 3/90 | NT | 8.6% | coding (21/114 nt) | ymjB | hypothetical protein |
| ? | W3110S.gb | 1383562 = | 35 (0.680) | coding (60/114 nt) | ymjB | hypothetical protein | |||||
AACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAG > W3110S.gb/1383455‑1383593 | cttccccctgtatttagcgaattgctatttccgtttctgcatcaaagaaatgacatttcgtcatatcaaaa < 1:820516‑M1/3‑1 (MQ=255) gTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTaaa < 1:4355320/66‑1 (MQ=255) tGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTa < 1:862408/71‑1 (MQ=255) ctgaatttagcgaattgctatttccgtttctgcatcaaacaaatgacatttcgtcatatcaaaa < 1:3991950‑M1/3‑1 (MQ=255) ggAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCa < 1:4958756/71‑1 (MQ=255) tatttagcgaattgctatttccgtttctgcatcaaagaaatgacatttcgtcatatcaa > 1:4866079‑M1/59‑59 (MQ=255) gCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGgag > 1:3276101/1‑70 (MQ=255) tctACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGgaga > 1:5187343/1‑69 (MQ=255) ctACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaaaa > 1:1177226/1‑71 (MQ=255) acacCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTaaa < 1:417758/48‑1 (MQ=255) acacCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAata > 1:4260162/1‑71 (MQ=255) caccacGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaa < 1:2367258/66‑1 (MQ=255) tatttccgtttctgcatcaaagaaatgacatttcgtcatatcaa > 1:2914178‑M1/44‑44 (MQ=255) ccacGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCa > 1:4387825/1‑71 (MQ=255) cacGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAata > 1:5359878/1‑67 (MQ=255) cacGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCAc > 1:4006009/1‑71 (MQ=255) cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTa < 1:1486760/40‑1 (MQ=255) cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTa < 1:3492449/71‑1 (MQ=255) cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTa > 1:166467/1‑71 (MQ=255) ttGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTc < 1:1859879/71‑1 (MQ=255) ggggCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAtt < 1:1666853/71‑1 (MQ=255) ggggCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAt < 1:1506693/70‑1 (MQ=255) cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa < 1:3115470/71‑1 (MQ=255) aCGAGTTAGTGGTGCGTGCTGGTGGGTTAAATGATTATCATGCa < 1:3420243/44‑1 (MQ=38) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGat < 1:953973/71‑1 (MQ=255) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa > 1:1983822/1‑70 (MQ=255) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa > 1:1567954/1‑70 (MQ=255) tcaaagaaatgacatttcgtcatatcaAAATGATTATCATGCAGGAGAAAATATCACTATTCAt > 1:2889983‑M1/28‑64 (MQ=255) gAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAtttt < 1:5282694/66‑1 (MQ=255) aaagaaatgacatttcgtcatatcaAAATGATTATCATGCAGGAGAAAat < 1:4615274‑M1/25‑1 (MQ=255) ttAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATg < 1:2551182/37‑1 (MQ=255) ttAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata < 1:1775217/67‑1 (MQ=255) aGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4066575/62‑1 (MQ=255) aGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat > 1:1046565/1‑66 (MQ=255) aGTGGTCCGTGCGGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACg > 1:4036453/1‑70 (MQ=255) gTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGaa < 1:4788736/71‑1 (MQ=255) gTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGa < 1:2862509/70‑1 (MQ=255) ccGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGa > 1:990464/1‑62 (MQ=255) ccGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGt > 1:4717940/1‑70 (MQ=255) cGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTc < 1:2049172/70‑1 (MQ=255) tcTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4072749/51‑1 (MQ=255) tgtcatttcaAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTc > 1:2018818‑M1/11‑71 (MQ=255) tGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTg < 1:2661620/71‑1 (MQ=255) gCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata > 1:2099596/1‑49 (MQ=255) cGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGa < 1:3504112/70‑1 (MQ=255) ttAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4882837/43‑1 (MQ=255) ttAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTg < 1:4879121/67‑1 (MQ=255) tAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg > 1:750416/1‑69 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:5144547‑M1/68‑1 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:2172224‑M1/68‑1 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:1724544‑M1/68‑1 (MQ=255) AAATGATTATCAT‑CAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAg < 1:3495387‑M1/70‑1 (MQ=255) | AACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAG > W3110S.gb/1383455‑1383593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |