| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2033398 | 44 (0.750) | 3 (0.060) | 3/92 | NT | 7.2% | coding (1057/1419 nt) | dcm | DNA cytosine methylase |
| ? | W3110S.gb | = 2033414 | 38 (0.720) | coding (1041/1419 nt) | dcm | DNA cytosine methylase | |||||
AAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACTTC > W3110S.gb/2033332‑2033468 | aactttCCGCGCCATCTTTGTAATAACGCTCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATaa < 1:2371866/68‑1 (MQ=255)aaaTTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATa < 1:2935116/70‑1 (MQ=255)aaaTTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATa > 1:4872217/1‑70 (MQ=255) aTTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGa < 1:2897258/66‑1 (MQ=255) tttCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAAc > 1:4139528/1‑70 (MQ=255) tCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCa < 1:4338889/70‑1 (MQ=255) tCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCAt > 1:3605523/1‑71 (MQ=255) cgcgCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCAtt < 1:1868558/70‑1 (MQ=255) cgcgCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTc < 1:178413/71‑1 (MQ=255) cgcaCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCAtt < 1:383079/70‑1 (MQ=255) gcCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCAt < 1:2875507/71‑1 (MQ=255) ccATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCAt > 1:2413809/1‑70 (MQ=255) cATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATaa > 1:1785953/1‑71 (MQ=255) aTCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGttatggaatgttttatc < 1:685635‑M1/71‑18 (MQ=255) aTCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAc < 1:4875977‑M2/71‑2 (MQ=255) aTCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAc < 1:2277160‑M2/71‑2 (MQ=255) aTCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAc < 1:2283295‑M2/71‑2 (MQ=255) tCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATa < 1:4952822/56‑1 (MQ=255) cTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAcc < 1:2645015‑M2/70‑3 (MQ=255) tGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAccg > 1:263484‑M2/1‑65 (MQ=255) gTAATAACGCGCAGACAGCTTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAccg > 1:4090979‑M2/1‑64 (MQ=255) gTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGc > 1:1212567/1‑71 (MQ=255) ataaCGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGttatggaatggtttatccgaa > 1:2218021‑M1/1‑45 (MQ=255) taaCGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGt > 1:3695268/1‑70 (MQ=255) aaCGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATa < 1:5086059/46‑1 (MQ=255) aCGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTa < 1:4168105/70‑1 (MQ=255) cgcgCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTAcc < 1:4226135/71‑1 (MQ=255) gcgcAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTa > 1:3485494/1‑68 (MQ=255) gcAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcgcg > 1:667192/1‑71 (MQ=255) gcAGACAGAGTACGCGTGACGCTTTGAGGATTGTTCGGATAAACCATTCCATa < 1:310982/53‑1 (MQ=255) cAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcgcgc < 1:4047234/71‑1 (MQ=255) gACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcgcgcg > 1:2690089/1‑70 (MQ=255) cAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCt < 1:4994625/71‑1 (MQ=255) cGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGAt > 1:3194368/1‑71 (MQ=255) tACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTa < 1:439208/56‑1 (MQ=255) aCGCGTGACGCTTTGCGGATTGTTCGGttatggaatggtttatccg < 1:4388668‑M1/46‑20 (MQ=255) aCGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAccgaa > 1:2134548‑M2/1‑43 (MQ=255) cgcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCa > 1:2745202/1‑39 (MQ=255) cgcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTAcc > 1:2882733/1‑56 (MQ=255) gcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGcc < 1:1804185/49‑1 (MQ=255) gcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCt < 1:3609582/63‑1 (MQ=255) gcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGTTGtttt < 1:3945543/71‑1 (MQ=255) gcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGtttt < 1:1463279/71‑1 (MQ=255) gcgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGtttt < 1:2153250/71‑1 (MQ=255) cgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGttttt < 1:1053153/71‑1 (MQ=255) cgTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGttttt < 1:3595254/71‑1 (MQ=255) tGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCg < 1:4146290/47‑1 (MQ=255) gACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTg > 1:3101301/1‑60 (MQ=255) gACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGtttttt > 1:2747786/1‑69 (MQ=255) aCGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGcc > 1:2359413/1‑44 (MQ=255) aCGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcgc > 1:3420456/1‑52 (MQ=255) gCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGttt > 1:4767319/1‑63 (MQ=255) tttGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcg > 1:1018180/1‑47 (MQ=255) tttGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCatat > 1:934599/1‑71 (MQ=255) tttGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCata < 1:4700116/70‑1 (MQ=255) tGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATc < 1:4275740/70‑1 (MQ=255) tGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATc > 1:4533892/1‑70 (MQ=255) gCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCatat > 1:173197/1‑68 (MQ=255) gCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGa > 1:3863248/1‑71 (MQ=255) gATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATag < 1:1086540/71‑1 (MQ=255) ttCGGttatggaatggtttatccgaacaatccgcaaagcgtcacgcgt > 1:2134548‑M1/1‑5 (MQ=255) ttCGGATAAACCATTCCATAAccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttat > 1:2218021‑M2/1‑21 (MQ=255) ttCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGt < 1:2433370/70‑1 (MQ=255) cGGttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattaca > 1:263484‑M1/1‑3 (MQ=255) cGGttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtaagctgtctgcgcgttattac > 1:4090979‑M1/1‑3 (MQ=255) cGGATAAACCATTCCATAAccgaacaatccgcaaagcgtcacgcgt < 1:4388668‑M2/46‑28 (MQ=255) cGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGttt > 1:4485172/1‑48 (MQ=255) ggttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattacaaag < 1:2645015‑M1/70‑69 (MQ=255) ggATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACt < 1:5068581/70‑1 (MQ=255) gttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattacaaagat < 1:2277160‑M1/71‑71 (MQ=255) gttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattacaaagat < 1:4875977‑M1/71‑71 (MQ=255) gttatggaatggtttatccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattacaaagat < 1:2283295‑M1/71‑71 (MQ=255) gATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATag > 1:2101360/1‑62 (MQ=255) gATAAAACATTCCATAAccgaacaatccgcaaagcgtcacgcgtacgctgtctgcgcgttattacaaagat < 1:685635‑M2/71‑55 (MQ=255) | AAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACTTC > W3110S.gb/2033332‑2033468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |