| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2971656 = | 65 (1.110) | 4 (0.080) | 3/92 | NT | 6.3% | coding (863/1194 nt) | ygeD | predicted inner membrane protein |
| ? | W3110S.gb | 2971686 = | 61 (1.160) | coding (833/1194 nt) | ygeD | predicted inner membrane protein | |||||
CAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGATAC > W3110S.gb/2971586‑2971725 | caaGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCgg > 1:921413/1‑71 (MQ=255) acctatctcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCt < 1:2742177‑M1/3‑1 (MQ=255) aGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCTGCt < 1:1473299/71‑1 (MQ=255) ggCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTg > 1:1084421/1‑71 (MQ=255) ggCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTg < 1:2110650/71‑1 (MQ=255) ggCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTg < 1:402349/71‑1 (MQ=255) ggCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTg < 1:4982329/71‑1 (MQ=255) cctatctcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTg > 1:233336‑M1/68‑71 (MQ=255) cctatctcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTg < 1:4484497‑M1/4‑1 (MQ=255) cctatctcaacgcgatggtagcgattggtatcgtggttggcgcaggggcggcagcgaagttagttacGCTg > 1:5299172‑M1/68‑71 (MQ=255) ctatctcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTgg > 1:3116829‑M1/67‑71 (MQ=255) tatctcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTgg < 1:3935562‑M1/5‑1 (MQ=255) tcaacgcgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTgg < 1:155774‑M1/5‑1 (MQ=255) gCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTgg < 1:5274948/65‑1 (MQ=255) gcagcaGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGc < 1:5130559/69‑1 (MQ=255) cgatggtagcgattggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTg < 1:1612677‑M1/4‑1 (MQ=255) cagcagCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGt > 1:4990766/1‑70 (MQ=255) cagcagCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTg < 1:4030604/71‑1 (MQ=255) gcTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACg < 1:2022164/71‑1 (MQ=255) gcTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACg > 1:4018511/1‑71 (MQ=255) gcTCGTGTTGCAGGGAAAAAATAAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACg > 1:1960202/1‑71 (MQ=255) tCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGt > 1:2556705/1‑71 (MQ=255) cGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGtt > 1:4782759/1‑71 (MQ=255) gtgtTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGttt > 1:1683121/1‑71 (MQ=255) gtgtTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGttt > 1:1673222/1‑71 (MQ=255) gtgtTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGttt < 1:2199411/71‑1 (MQ=255) tgtTGCAGGGAAAAAATCAGTACGACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTc < 1:807837/71‑1 (MQ=255) tgtTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTc < 1:1065104/71‑1 (MQ=255) gtTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGacac < 1:1442453/64‑1 (MQ=255) ttGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACg < 1:1335421/64‑1 (MQ=255) ttGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCa < 1:488005/71‑1 (MQ=255) ttGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCa < 1:1888350/71‑1 (MQ=255) tggtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTGGCATACAGCGTGACACGGTTTCCAg < 1:5168080‑M1/29‑1 (MQ=255) tGCAGGCAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAg > 1:695901/1‑71 (MQ=255) gCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGc > 1:478094/1‑71 (MQ=255) gtatcgtggttggcgcaggtgcggcagcgaagttagttacGCTGGCATACAGCGTGACACGGTTTCCAGc > 1:3061685‑M1/41‑70 (MQ=255) cAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGc < 1:3053162/42‑1 (MQ=255) cAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGc < 1:2195725/70‑1 (MQ=255) aGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt < 1:1797009/71‑1 (MQ=255) aGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt < 1:2380283/71‑1 (MQ=255) aGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt < 1:4924972/71‑1 (MQ=255) gggAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGta < 1:2761741/71‑1 (MQ=255) gggAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGta < 1:2853348/71‑1 (MQ=255) gggAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt > 1:2944337/1‑70 (MQ=255) ggAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGc < 1:5029342/50‑1 (MQ=255) gAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACa < 1:5246441/47‑1 (MQ=255) gtggttggcgcaggtgcggcagcgaagttagttacGCTg < 1:836097‑M1/4‑1 (MQ=255) aaaaaaTCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGtaac > 1:5361709/1‑70 (MQ=255) aaaaTCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGa < 1:307049/50‑1 (MQ=255) gttggcgcaggtgcggcagcgaagttagttacGCTg < 1:341238‑M1/4‑1 (MQ=255) aaTCAGTACCACCACGCCAATCAAAATCCCGGCTGGc > 1:4699594/1‑37 (MQ=255) aaTCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTaactaact < 1:5245556/71‑1 (MQ=255) aaTCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTaactaact < 1:2021922/71‑1 (MQ=255) cAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCg > 1:5227968/1‑71 (MQ=255) aGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCg < 1:624212/70‑1 (MQ=255) aGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGc < 1:3717762/71‑1 (MQ=255) aGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGc > 1:1380221/1‑71 (MQ=255) gTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCt < 1:332005/71‑1 (MQ=255) tgcggcagcgaagttagttacGCTGGCATACAGCGTGACACGGTTTCCa < 1:4461234‑M1/28‑1 (MQ=255) accacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGtaactaac < 1:5205278/60‑1 (MQ=255) accacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCg > 1:2297224/1‑70 (MQ=255) accacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCg > 1:1988783/1‑70 (MQ=255) aacacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt > 1:4750468/3‑53 (MQ=255) ccacGCCAATCAAAATCCCGTCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGc > 1:1281345/1‑64 (MQ=255) ccacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGttt > 1:875875/1‑45 (MQ=255) ccacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCa > 1:1012698/1‑71 (MQ=255) cacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCt < 1:1481278/64‑1 (MQ=255) cacGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCt > 1:4564256/1‑64 (MQ=255) ggcagcgaagttagttacGCTGGCATACAGCGTGACACGGTTTCCAGc > 1:4321385‑M1/19‑48 (MQ=255) cGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCa > 1:2872537/1‑68 (MQ=255) gCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCAc < 1:3345895/68‑1 (MQ=255) ccAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTgc > 1:4347829/1‑71 (MQ=255) ccAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTgc > 1:4162612/1‑71 (MQ=255) ccAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTgc < 1:4072216/71‑1 (MQ=255) aaTCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGcc < 1:1978611/61‑1 (MQ=255) aaTCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTgcgc > 1:331088/1‑71 (MQ=255) tCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGt < 1:3174309/43‑1 (MQ=255) cAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCaa > 1:1843557/1‑71 (MQ=255) cAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCaa > 1:5097152/1‑71 (MQ=255) cAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCaa > 1:5102954/1‑71 (MQ=255) aaaaTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAAc > 1:3772424/1‑71 (MQ=255) aaaaTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAAc > 1:1531426/1‑71 (MQ=255) aaaTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAAcc < 1:1175383/71‑1 (MQ=255) aaTCCCGGCTGGCATACAGCGTGACGCGGTTTCCAGCGTaactaact < 1:1783181/47‑1 (MQ=255) aaTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCa > 1:1444569/1‑71 (MQ=255) aTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCAc > 1:1769951/1‑71 (MQ=255) aTCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTG‑‑GCACCTGCGCCAACCACGa > 1:1182748/1‑71 (MQ=255) tCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACg < 1:4728098/71‑1 (MQ=255) ccGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTc < 1:265035/45‑1 (MQ=255) ccGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGa > 1:5003165/1‑70 (MQ=255) ccGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGa < 1:1220016/70‑1 (MQ=255) ccGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGa > 1:2357301/1‑70 (MQ=255) ccGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGAt < 1:1364681/71‑1 (MQ=255) ggCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGATAc > 1:4530229/1‑71 (MQ=255) GCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGcc > 1:2589905‑M1/1‑59 (MQ=255) GCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGATAc < 1:606586‑M1/70‑1 (MQ=255) | CAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTGGCATACAGCGTGACACGGTTTCCAGCGTAACTAACTTCGCTGCCGCACCTGCGCCAACCACGATAC > W3110S.gb/2971586‑2971725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |