| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3277473 = | 52 (0.890) | 5 (0.100) | 4/90 | NT | 9.6% | coding (282/465 nt) | yhaV | conserved hypothetical protein |
| ? | W3110S.gb | 3277502 = | 48 (0.930) | coding (311/465 nt) | yhaV | conserved hypothetical protein | |||||
ATGGCAAGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCT > W3110S.gb/3277403‑3277541 | taggcatctgtttttttaccgtaggtgcgcagagtgttttcatcgttcatccatcccagaatgatgacttt < 1:1942563‑M1/1‑1 (MQ=255)aTGGCAAGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGt < 1:1626327/71‑1 (MQ=255) ggcatctgtttttttaccgtaggtgcgcagagtgttttcatcgttcatccatcccagaatgatgactttct < 1:4336835‑M1/3‑1 (MQ=255) ggcatctgtttttttaccgtaggtgcgcagagtgttttcatcgttcatccatcccagaatgatgactttc > 1:4464255‑M1/69‑70 (MQ=255) tctgtttttttaccgtaggtgcgcagagtgttttcatcgttcatccatcccagaatgatgacttTctct > 1:3769984‑M1/65‑69 (MQ=255) aGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCtcttc > 1:4488188/1‑71 (MQ=255) tttttttaccgtaggtgcgcagagtgttttcatcgttcatccatcccagaatgatgacttt > 1:2220795‑M1/61‑61 (MQ=255) ttAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCg < 1:1625288/71‑1 (MQ=255) tAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGt > 1:1706230/1‑71 (MQ=255) aGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTc > 1:4566665/1‑68 (MQ=255) ctGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGt > 1:821775/1‑71 (MQ=255) tGGGAAAAATAAAGACTTGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAg < 1:404686/69‑1 (MQ=255) taggtgcgcagagtgttttcatcgttcatccatcccagaatgatgactttctcct < 1:3889702‑M1/6‑3 (MQ=255) ggAAAAATAGAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGa > 1:2087685/1‑70 (MQ=255) gAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaa < 1:19934/71‑1 (MQ=255) gAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaa < 1:914921/71‑1 (MQ=255) aaaaTAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaaaa < 1:688884/71‑1 (MQ=255) aaaaTAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaa > 1:2704844/1‑69 (MQ=255) gcagagtgttttcatcgttcatccatcccagaatgatgacttTCTCTTCTTTCGTTATAGTGAAAAAgaga > 1:3828547‑M1/43‑71 (MQ=255) cagagtgttttcatcgttcatccatcccagaatgatgacttTCTCTTCTTTCGTTATAGTGAAAAAgaga > 1:2485705‑M1/42‑70 (MQ=255) aaaGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTc > 1:1637236/1‑52 (MQ=255) aaaGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAgaga > 1:3840070/1‑70 (MQ=255) aaGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAgaga > 1:2230712/1‑69 (MQ=255) aaGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGaaa < 1:4450513/71‑1 (MQ=255) aaGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGaaa < 1:1365282/71‑1 (MQ=255) gagtgttttcatcgttcatccatcccagaatgatgacttTCTCTTCTTTCGTTATAGTGAAAAAgaga < 1:582623‑M1/29‑1 (MQ=255) cTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtca > 1:1273918/1‑71 (MQ=255) gTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtcatca > 1:1555516/1‑71 (MQ=255) gTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtcatca > 1:1920079/1‑71 (MQ=255) cACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAagag > 1:4668700/1‑59 (MQ=255) aCGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCttt < 1:747736/40‑1 (MQ=255) cGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCt > 1:216297/1‑71 (MQ=255) cGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCt < 1:4606077/71‑1 (MQ=255) ggTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTta < 1:3188426/42‑1 (MQ=255) cgttcatccatcccagaatgatgacttTCTCTTCTTTCGTTATAGTGaaa < 1:2075762‑M1/23‑1 (MQ=255) aaaTTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGgga < 1:2108445/69‑1 (MQ=255) aTTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaaaa < 1:1046794/46‑1 (MQ=255) tttGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaaa > 1:5344853/1‑44 (MQ=255) tttGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGt > 1:3202010/1‑53 (MQ=255) tttGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTgg < 1:4273902/64‑1 (MQ=255) ttGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGggatggat > 1:4035058/1‑70 (MQ=255) catcccagaatgatgacttTCTCTTCTTTCGTTATAGTg > 1:3792488‑M1/20‑39 (MQ=255) tGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGggatgg > 1:2098916/1‑67 (MQ=255) tGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGgatggatg < 1:1928608/70‑1 (MQ=255) tGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGggatgg < 1:2269855/64‑1 (MQ=255) tGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACg < 1:2140650/71‑1 (MQ=255) gCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTc < 1:4469743/55‑1 (MQ=255) cTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCt > 1:5138344/1‑55 (MQ=255) cTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGAt > 1:4919056/1‑71 (MQ=255) cTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGAt < 1:607049/71‑1 (MQ=255) tGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTgggtt < 1:1274343/59‑3 (MQ=255) tGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGAt > 1:2968872/1‑70 (MQ=255) tGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGAt > 1:3551413/1‑70 (MQ=255) ggTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGaaa < 1:1245232/42‑1 (MQ=255) gTCGTTATTGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATg < 1:1347785/69‑1 (MQ=255) gTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAgaga < 1:4831407/39‑1 (MQ=255) gTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGaa > 1:3713486/1‑40 (MQ=255) gTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaa < 1:4158056/71‑1 (MQ=255) gTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaa < 1:274313/71‑1 (MQ=255) gTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGa > 1:4039713/1‑70 (MQ=255) tCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCt < 1:5159345/51‑1 (MQ=255) tCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaa > 1:3327895/1‑70 (MQ=255) tCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGa > 1:2168250/1‑69 (MQ=255) gTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtc < 1:3167646/41‑1 (MQ=255) aTCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACAct > 1:4993727/1‑71 (MQ=255) aTCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACAct > 1:609953/1‑71 (MQ=255) tCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtcat > 1:1082724/1‑39 (MQ=255) tCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaa < 1:488126/64‑1 (MQ=255) cGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACActct > 1:692866/1‑71 (MQ=255) gTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaaa > 1:2598300/1‑63 (MQ=255) gTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAaca < 1:833984/66‑1 (MQ=255) TCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGaaaa > 1:763306‑M1/1‑63 (MQ=255) | ATGGCAAGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCT > W3110S.gb/3277403‑3277541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |