| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 975192 | 31 (0.530) | 4 (0.080) | 3/90 | NT | 10.6% | coding (452/1323 nt) | mukF | Involved in chromosome partioning, Ca2+ binding protein |
| ? | W3110S.gb | = 975218 | 40 (0.770) | coding (478/1323 nt) | mukF | Involved in chromosome partioning, Ca2+ binding protein | |||||
AAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAG > W3110S.gb/975149‑975286 | aaaCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACt < 1:3780278‑M2/71‑2 (MQ=255) aaCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACt > 1:3906655‑M2/1‑69 (MQ=255) aCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACtg < 1:3766125‑M2/70‑3 (MQ=255) aCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACtg < 1:660129‑M2/70‑3 (MQ=255) aCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACtg < 1:2255841‑M2/70‑3 (MQ=255) cgcgCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACtgaa > 1:4694973‑M2/1‑67 (MQ=255) gcgcAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACtgaaa < 1:5294455‑M2/71‑6 (MQ=255) cagcagATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAatat < 1:4551336/71‑1 (MQ=255) agcagATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATAtt < 1:3694648/71‑1 (MQ=255) gcagATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATAtt > 1:3955871/1‑70 (MQ=255) gcagATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTc < 1:3583594/71‑1 (MQ=255) gATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCgg > 1:3388535/1‑70 (MQ=255) gATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGt < 1:927821/71‑1 (MQ=255) gATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGt < 1:4005477/71‑1 (MQ=255) cgccgAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAg < 1:883384/71‑1 (MQ=255) gccgAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGa < 1:4735292/71‑1 (MQ=255) cgAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGaaa > 1:1823004/1‑71 (MQ=255) aaGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAAtt < 1:2467780/71‑1 (MQ=255) agagGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAAttt < 1:249106/71‑1 (MQ=255) gggCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCg < 1:4158195/71‑1 (MQ=255) gCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGAc < 1:1170618/71‑1 (MQ=255) cGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACa < 1:2125866/71‑1 (MQ=255) ggTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAg < 1:80553/71‑1 (MQ=255) tgatgaATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGaa < 1:3146413/58‑1 (MQ=255) tgatgaATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGa < 1:3572786/57‑1 (MQ=255) atgaATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATc < 1:1047199/71‑1 (MQ=255) atgaATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATc > 1:1411243/1‑71 (MQ=255) aTTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGAcc < 1:2842723/71‑1 (MQ=255) aTTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGAcc < 1:4709116/71‑1 (MQ=255) ttCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCg > 1:1293762/1‑41 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTc > 1:2573046/1‑39 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAAtt > 1:1962782/1‑52 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTg < 1:344618/70‑1 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTg < 1:3265368/70‑1 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTg < 1:3271684/70‑1 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTg < 1:1572304/70‑1 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGa > 1:2267242/1‑71 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGa > 1:2830052/1‑71 (MQ=255) cACTGGCACCGTAATGTCTATGCGCCACtgaaattcatcaccgcc > 1:3949685‑M2/1‑28 (MQ=255) cACTGGCACCGTAATGTCTATGCGCCACtgaaattcatcaccgcc > 1:2528917‑M2/1‑28 (MQ=255) cTGGCACCGTAATGTCTATGCGCCACtgaaattcatcaccgccct < 1:527359‑M2/45‑20 (MQ=255) cACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTa < 1:161094/55‑1 (MQ=255) cACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAAc > 1:2714367/1‑70 (MQ=255) aCCGTAATGTCTATGCGCCACtgaaattcatcaccgccctcttcggcggcatctgctgcgcgtttgagct < 1:1875817‑M2/70‑50 (MQ=255) cGTAATTTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCt < 1:1763075/71‑1 (MQ=255) gTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCt > 1:153003/1‑70 (MQ=255) gTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCt > 1:1683203/1‑70 (MQ=255) tGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATgg < 1:2398962/71‑1 (MQ=255) gTCTATGGGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGAt < 1:5154021/68‑1 (MQ=255) aTGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGaa > 1:462516/1‑71 (MQ=255) tGCGCCACTGAAATATTCGGTATCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACg < 1:2152557/68‑1 (MQ=255) tGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTg > 1:4498313/1‑61 (MQ=255) tGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGa > 1:4520282/1‑62 (MQ=255) tGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGaa > 1:3166437/1‑70 (MQ=255) tGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGaa > 1:1436177/1‑70 (MQ=255) tGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGa < 1:3639773/69‑1 (MQ=255) gcgcCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGAcc > 1:106782/1‑46 (MQ=255) ccACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAAcag > 1:2673915/1‑69 (MQ=255) aCTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGCCGAAcagcag > 1:3352681/1‑70 (MQ=255) cTGAAATATTCGGTAGCAGAAATTTTCGACAGTATc < 1:3286549/36‑1 (MQ=255) cTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGa > 1:1697996/1‑43 (MQ=255) | AAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAG > W3110S.gb/975149‑975286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |