| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3064705 | 82 (1.400) | 4 (0.080) | 3/88 | NT | 5.5% | coding (1248/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase |
| ? | W3110S.gb | = 3064723 | 67 (1.330) | coding (1266/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase | |||||
Only 100 of 117 total aligned reads displayed.
AAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATC > W3110S.gb/3064655‑3064792 | aaaGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgt < 1:4497947‑M2/71‑3 (MQ=255)aaaGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgt < 1:4792123‑M2/71‑3 (MQ=255)aaaGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgt < 1:1977680‑M2/71‑3 (MQ=255)aaaGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAg < 1:199633‑M2/70‑2 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtg > 1:3028738‑M2/1‑68 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgt < 1:2929059‑M2/70‑3 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAg > 1:3349867‑M2/1‑68 (MQ=255) gaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtgat < 1:5164268‑M2/71‑6 (MQ=255) aagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtga > 1:4476395‑M2/1‑65 (MQ=255) ggCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:5268406/71‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAc < 1:175354/71‑1 (MQ=255) aGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtg > 1:3297511‑M2/1‑59 (MQ=255) aGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:3607746/1‑71 (MQ=255) aGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:1922913/1‑71 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGAtcatca > 1:1138746/1‑68 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:2016514/1‑70 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:2829454/1‑70 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:885939/1‑70 (MQ=255) aTCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAg > 1:279497‑M2/1‑57 (MQ=255) ctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGaa > 1:527828/1‑70 (MQ=255) ctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGaa > 1:3183613/1‑70 (MQ=255) cAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtgatc < 1:4226369‑M2/59‑7 (MQ=255) cAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCTAAc > 1:2637825/1‑69 (MQ=255) cAACCGTCGTGCCAATGTGCAGACATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAAc > 1:168820/1‑69 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgt < 1:2557800‑M2/54‑3 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACaa < 1:4486051/70‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:521125/1‑71 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGAtcatca > 1:1442937/1‑60 (MQ=255) cgtcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGa < 1:4775462/71‑1 (MQ=255) tcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtga > 1:5048924‑M2/1‑47 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtgat < 1:1337679‑M2/50‑6 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:3158954/1‑57 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGa > 1:3072908/1‑59 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCg > 1:1234547/1‑70 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGc > 1:4137162/1‑71 (MQ=255) tGCCAATGTGCAGCCATGTTGATCACAGCGAATACAGCGTCAAAGTGATCATCAc > 1:654837/1‑55 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGAt < 1:5024648/65‑1 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCg < 1:3801392/70‑1 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCg < 1:3599868/70‑1 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGa > 1:268868/1‑71 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGa > 1:2306549/1‑71 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGa > 1:5272579/1‑71 (MQ=255) aaTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATc < 1:4178302/71‑1 (MQ=255) aaTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATc > 1:2243122/1‑71 (MQ=255) aaTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATc > 1:5356024/1‑71 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATc > 1:4049870/1‑70 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCt > 1:4131713/1‑71 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCt < 1:3936677/71‑1 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCt > 1:5087469/1‑71 (MQ=255) tgtgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAgtgat < 1:3968210‑M2/43‑6 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat > 1:756221/1‑44 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTgc < 1:4285180/70‑1 (MQ=255) cAGCCATGTTGATCTCAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:5363700/71‑1 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGC‑TCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCgg > 1:357361/1‑71 (MQ=255) gCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:3164210/49‑1 (MQ=255) ccATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTc > 1:3136498/1‑71 (MQ=255) ccATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTc > 1:2847546/1‑71 (MQ=255) acaTGTTGATCACAGCGAACACAGCGTCAAAgtga < 1:3909202‑M2/34‑5 (MQ=255) cATGTTGATCACAGCGAACACAGCGTCAAAgtgatcatcatggctgcacattggcacgacggttgagatct < 1:4685917‑M2/71‑42 (MQ=255) cATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCg < 1:5260801/58‑1 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGa < 1:2092139/43‑1 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCTCCGATCTGCGCGGTCtt < 1:3064676/71‑1 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCtt > 1:4633369/1‑71 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCtt > 1:4158484/1‑71 (MQ=255) tGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt > 1:2962510/1‑67 (MQ=255) tGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCttt < 1:3389926/71‑1 (MQ=255) tGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCttt < 1:4001292/71‑1 (MQ=255) gTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTc > 1:1044306/1‑71 (MQ=255) ttGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTc < 1:460804/70‑1 (MQ=255) tGATCACAGCGAACACAGCGTCAAAgtgatcaacatggctgcacattggcacgacggttgagatcttgcct < 1:4837859‑M2/71‑47 (MQ=255) gATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGAt > 1:3721248/1‑47 (MQ=255) gATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCt > 1:2789801/1‑65 (MQ=255) tCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt < 1:4449937/61‑1 (MQ=255) cacaGCGAACACAGCGTCAAAGTGATTATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCt > 1:4736520/1‑71 (MQ=255) cacaGCGAACACAGCGTCAAAGTGATCATCACCGAAc < 1:280322/37‑1 (MQ=255) cacaGCGAACACAGCGTCAAAGTGATCATCACCGAAc < 1:2081707/37‑1 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCtt < 1:3395467/71‑1 (MQ=255) caGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTc < 1:3813712/71‑1 (MQ=255) caGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTc < 1:1226292/71‑1 (MQ=255) aGCGAACACAGCGTCAAAgtgatcaacatggctgcacattgg < 1:1231982‑M2/42‑25 (MQ=255) aGCGAACACAGCGTCAAAGTGATCATCACCGAACAAggg < 1:3980063/39‑1 (MQ=255) aGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCa < 1:2223990/71‑1 (MQ=255) gCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTgc > 1:4685682/1‑51 (MQ=255) gAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGAACTGCGCGGTCTTTcc > 1:3445877/1‑60 (MQ=255) cacaGCGTCAAAGTGATCATCACCGAACAAGGGAt > 1:167238/1‑35 (MQ=255) cacaGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAcgcg < 1:2075504/70‑1 (MQ=255) cacaGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACgcgc > 1:611648/1‑71 (MQ=255) caGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCtt < 1:918801/52‑1 (MQ=255) cGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAcgc < 1:2221247/64‑1 (MQ=255) tCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTcccc < 1:4956500/52‑1 (MQ=255) tCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCAc < 1:2257380/70‑1 (MQ=255) tCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACt < 1:3464330/71‑1 (MQ=255) cAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt < 1:1914311/43‑1 (MQ=255) cAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTcc > 1:2143354/1‑49 (MQ=255) cAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa > 1:1091825/1‑71 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc > 1:1741366/1‑58 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa < 1:3297672/70‑1 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa < 1:1665061/70‑1 (MQ=255) aGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt > 1:148640/1‑40 (MQ=255) aGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc < 1:2133052/56‑1 (MQ=255) | AAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATC > W3110S.gb/3064655‑3064792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |