| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3846877 | 45 (0.770) | 5 (0.100) | 3/88 | NT | 10.5% | coding (144/858 nt) | htrL | hypothetical protein |
| ? | W3110S.gb | = 3846886 | 46 (0.910) | coding (153/858 nt) | htrL | hypothetical protein | |||||
TAGCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGGTTATC > W3110S.gb/3846819‑3846955 | tAGCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTatt < 1:2073477‑M2/71‑4 (MQ=255) gCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTatttt > 1:1673161‑M2/1‑66 (MQ=255) gCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTattt > 1:657489‑M2/1‑66 (MQ=255) gCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTatt > 1:3898422‑M2/1‑66 (MQ=255) tCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTattttca < 1:1721864‑M2/71‑8 (MQ=255) gTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACt > 1:2465788/1‑71 (MQ=255) ttCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTattt > 1:2848938‑M2/1‑61 (MQ=255) ttCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACtt < 1:2173688/71‑1 (MQ=255) aGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTtct < 1:1647376/70‑1 (MQ=255) aGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTtct < 1:2656619/70‑1 (MQ=255) ttGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTccc < 1:884732/71‑1 (MQ=255) ttGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTccc > 1:4675209/1‑71 (MQ=255) tGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGatt > 1:4388490/1‑55 (MQ=255) tGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTattttca < 1:2553449‑M2/62‑8 (MQ=255) gATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTattttc > 1:95664‑M2/1‑54 (MQ=255) gATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGa > 1:811017/1‑71 (MQ=255) gTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTatttt > 1:5265795‑M2/1‑51 (MQ=255) gTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAttt > 1:1064382/1‑71 (MQ=255) tATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGa < 1:4296552/70‑1 (MQ=255) tATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGa < 1:3262178/70‑1 (MQ=255) tttAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAAc < 1:3390560/70‑1 (MQ=255) aCTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGtt > 1:3158575/1‑71 (MQ=255) aCTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGt > 1:1476990/1‑70 (MQ=255) cTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAt < 1:3694800/55‑1 (MQ=255) cTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGtt > 1:3714913/1‑70 (MQ=255) tttGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAt < 1:1727930/54‑1 (MQ=255) tttGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAt < 1:4692756/54‑1 (MQ=255) tttGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCaa > 1:966501/1‑64 (MQ=255) tGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGaa < 1:5086824/70‑1 (MQ=255) tGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGaa > 1:558991/1‑70 (MQ=255) tGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAg > 1:5174806/1‑71 (MQ=255) tGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAg > 1:4174671/1‑71 (MQ=255) gCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGa < 1:496277/71‑1 (MQ=255) gCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGa > 1:1494397/1‑71 (MQ=255) gCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGa < 1:3774875/71‑1 (MQ=255) cGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATCTGAAACCAAGGGTTGAAGCGAt < 1:4917780/71‑1 (MQ=255) gTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTg < 1:3132848/63‑1 (MQ=255) gTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGAtt > 1:1503554/1‑71 (MQ=255) tCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAttt < 1:5184844/48‑1 (MQ=255) tCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTc > 1:4425820/1‑71 (MQ=255) tGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCg > 1:4711569/1‑70 (MQ=255) gCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAAc < 1:4831623/49‑1 (MQ=255) cGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGAtt > 1:16241/1‑41 (MQ=255) cGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGaa > 1:429315/1‑58 (MQ=255) gCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACgg < 1:4434578/71‑1 (MQ=255) aCTTGAAAATGAGATGATTATTTTCACTTCTCCCGAttt > 1:1912014/1‑39 (MQ=255) aCTTGAAAATGAGATGATTATTTTCACTTCTCCCGAttt > 1:1689103/1‑39 (MQ=255) ttGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGaaaa > 1:3166637/1‑71 (MQ=255) ttGAAAATGAGATGATTATCTTCACTTCTCCCGATTTGAAACCAAGGGTTGa < 1:4830363/52‑1 (MQ=255) tGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAAc > 1:787252/1‑71 (MQ=255) gAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGt > 1:388682/1‑47 (MQ=255) gAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGa > 1:3697147/1‑55 (MQ=255) gAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGAtt > 1:3790296/1‑57 (MQ=255) gAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAAc > 1:3031581/1‑63 (MQ=255) aaaaTGAGATGATTattttcaagtgcggccagacgctcaaagt > 1:3031238‑M2/1‑14 (MQ=255) aaaTGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACcaa > 1:4644904/1‑71 (MQ=255) aaTGAGATGATTattttcaagtgcggccagacgctca > 1:4059090‑M2/1‑12 (MQ=255) aaTGAGATGATTattttcaagtgcggccagacgctca > 1:3536789‑M2/1‑12 (MQ=255) aaTGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACcaa > 1:288756/1‑70 (MQ=255) aTGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACcaaca < 1:877572/71‑1 (MQ=255) gatgatTattttcaagtgcggccagacgctcaaagtaact < 1:4215328‑M2/40‑34 (MQ=255) gatgatTattttcaagtgcggccagacgctcaaagtaact < 1:3412330‑M2/40‑34 (MQ=255) gtgatTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGgt > 1:1131856/2‑71 (MQ=255) atgatTATTTTCACTTCTCCCGATTTGAAACCAAGTGTTGAAGCGAtt < 1:2628695/48‑1 (MQ=255) atgatTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACcaac < 1:3883538/65‑1 (MQ=255) atgatTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACgg < 1:1427423/70‑1 (MQ=255) tgatTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGa > 1:2760016/1‑45 (MQ=255) attattTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGgtta < 1:1586976/70‑1 (MQ=255) ttattTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGgttatc < 1:5075785/71‑1 (MQ=255) | TAGCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGGTTATC > W3110S.gb/3846819‑3846955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |