| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4131934 | 57 (0.970) | 3 (0.060) | 3/88 | NT | 5.3% | coding (107/879 nt) | php | predicted hydrolase |
| ? | W3110S.gb | = 4131944 | 58 (1.150) | coding (117/879 nt) | php | predicted hydrolase | |||||
TTGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGGCGCAA > W3110S.gb/4131877‑4132012 | ttGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGat > 1:10295‑M2/1‑68 (MQ=255)ttGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGat < 1:1949870‑M2/70‑3 (MQ=255)ttGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGat < 1:2403453‑M2/70‑3 (MQ=255)ttGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGat > 1:4181332‑M2/1‑68 (MQ=255)ttGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGat > 1:5187345‑M2/1‑68 (MQ=255) aTCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaac < 1:2817623‑M2/71‑7 (MQ=255) aTCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaac < 1:1042893‑M2/71‑7 (MQ=255) aTCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaa > 1:4818350‑M2/1‑65 (MQ=255) ctctcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaacg < 1:2924173‑M2/70‑8 (MQ=255) ctctcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGa > 1:4446300/1‑71 (MQ=255) ctcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatg > 1:1315841‑M2/1‑61 (MQ=255) ctcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAcc > 1:4610177/1‑71 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaac > 1:4979527‑M2/1‑60 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatgaac > 1:5369978‑M2/1‑60 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGatga > 1:2912030‑M2/1‑60 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAcc > 1:2142247/1‑70 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAc < 1:971336/69‑1 (MQ=255) tcCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCt > 1:4267357/1‑71 (MQ=255) cgtcTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCt < 1:4780893/66‑1 (MQ=255) cGGCTTTAAAAACAACGTGGATTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCt < 1:2522638/69‑1 (MQ=255) cGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtg < 1:5067078/70‑1 (MQ=255) cGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCt < 1:3547528/69‑1 (MQ=255) ggCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgat < 1:4818055/71‑1 (MQ=255) ggCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgat < 1:3277290/71‑1 (MQ=255) ggCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgat < 1:1584093/71‑1 (MQ=255) cTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgatga > 1:2865923/1‑71 (MQ=255) tttAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGAc > 1:101991/1‑71 (MQ=255) tAAAAACAACGTGGACTGCTGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCt > 1:4870004/1‑63 (MQ=255) aaaaaCAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAc > 1:4308989/1‑60 (MQ=255) aaaaaCAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAc > 1:4302865/1‑60 (MQ=255) aaaCAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGa > 1:2072030‑M2/1‑49 (MQ=255) acaacGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgat > 1:3181099/1‑61 (MQ=255) acaacGTGGACTGCCGCCTTAATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgc < 1:1873160/71‑1 (MQ=255) cagcGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcg > 1:2294053/4‑71 (MQ=255) acGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGAc > 1:4236245/1‑53 (MQ=255) acGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcgtg > 1:3958918/1‑71 (MQ=255) gTGGACTTCCGCCTTGATCATTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcgtgcg > 1:2110149/1‑71 (MQ=255) gTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcgtgcg > 1:2474480/1‑71 (MQ=255) gTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcgtgcg > 1:3255054/1‑71 (MQ=255) tGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgcgtgcgt < 1:3213962/71‑1 (MQ=255) gACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTa < 1:5260678/70‑1 (MQ=255) cTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCTTGCGTAAtg > 1:3794466/1‑71 (MQ=255) ccgccTTGATCAGTATGCGTTCATTTGCCAGGAGatga < 1:3020440‑M2/38‑5 (MQ=255) ccgccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAAtgtg < 1:1894560/70‑1 (MQ=255) ccgccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGa > 1:1265783/1‑71 (MQ=255) ccgccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGa < 1:2214295/71‑1 (MQ=255) gccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAtt < 1:1112333/71‑1 (MQ=255) gccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAtt > 1:2175695/1‑71 (MQ=255) gccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAtt > 1:810684/1‑71 (MQ=255) ccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgatta > 1:2405246/1‑45 (MQ=255) ccTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCtgatga > 1:1923384/1‑47 (MQ=255) cTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAtt > 1:1171965/1‑69 (MQ=255) ttGATCAGTATGCGTTCATTTGCCAGGAGatgaac > 1:1627268‑M2/1‑29 (MQ=255) ttGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTaa < 1:2247671/61‑1 (MQ=255) ttGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTaa < 1:500764/61‑1 (MQ=255) tGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAtt > 1:3298054/1‑67 (MQ=255) gATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgag < 1:4604559/69‑1 (MQ=255) gATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgag < 1:1530673/69‑1 (MQ=255) gATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgag < 1:2492053/69‑1 (MQ=255) gATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgag < 1:789505/69‑1 (MQ=255) aTCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGAt > 1:732528/1‑64 (MQ=255) aTCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGAt < 1:4878182/70‑1 (MQ=255) aTCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATg < 1:5293834/71‑1 (MQ=255) aGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGAcc < 1:5117972/71‑1 (MQ=255) gTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCa < 1:518905/71‑1 (MQ=255) tATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGgc < 1:4600955/45‑1 (MQ=255) aTGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAAc > 1:4917843/1‑71 (MQ=255) tGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAAtgt < 1:907698/54‑1 (MQ=255) gCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCg > 1:171933/1‑71 (MQ=255) cGTTCATTAGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCg < 1:2506048/70‑1 (MQ=255) gTTCATTTGCCAGGAGatgaacgcatactgatcaaggcggcagtccacg > 1:458831‑M2/1‑16 (MQ=255) gTTCATTTGCCAGGAGATGAACGACCTGATGAccc < 1:2455772/35‑1 (MQ=255) gTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCg > 1:1163454/1‑69 (MQ=255) gTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGtt < 1:15780/71‑1 (MQ=255) ttCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGAt < 1:771836/59‑1 (MQ=255) tCATTTGCCAGGAGatgaacgcatactgatcaaggcggcagtcca < 1:310320‑M2/45‑32 (MQ=255) tCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTa > 1:3468393/1‑70 (MQ=255) tCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTa > 1:3027029/1‑70 (MQ=255) cATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACa > 1:3911470/1‑71 (MQ=255) aTTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACa < 1:4128181/70‑1 (MQ=255) tttGCCAGGAGatgaacgcatactgatcaaggcggcagtccacgttgttttta < 1:4203523‑M2/53‑43 (MQ=255) tttGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACAt < 1:602774/70‑1 (MQ=255) tttGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATg < 1:1994458/71‑1 (MQ=255) tttGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATg < 1:3163699/71‑1 (MQ=255) ttGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgaga > 1:1685206/1‑53 (MQ=255) ttccAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCaa < 1:1732507/57‑1 (MQ=255) tGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATggg > 1:821174/1‑71 (MQ=255) gCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATggg < 1:2411012/70‑1 (MQ=255) ccAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATggg < 1:3239322/69‑1 (MQ=255) cAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTg < 1:2252240/46‑1 (MQ=255) aGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGgcg < 1:5261898/70‑1 (MQ=255) ggAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTgag > 1:1899208/1‑46 (MQ=255) gagaTGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGa > 1:2965704/1‑49 (MQ=255) gagaTGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGgcgcaa > 1:1215598/1‑71 (MQ=255) gagaTGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGgcgcaa > 1:390237/1‑71 (MQ=255) agaTGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGgcgc < 1:4246510/68‑1 (MQ=255) | TTGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGGCGCAA > W3110S.gb/4131877‑4132012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |