| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4274085 = | 90 (1.540) | 4 (0.080) | 3/90 | NT | 5.5% | coding (256/417 nt) | yjbQ | conserved hypothetical protein |
| ? | W3110S.gb | 4274103 = | 57 (1.100) | coding (274/417 nt) | yjbQ | conserved hypothetical protein | |||||
Only 100 of 115 total aligned reads displayed.
CGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGG > W3110S.gb/4274034‑4274171 | cGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCaa < 1:4750465/71‑1 (MQ=255)cGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCa > 1:4689148/1‑70 (MQ=255)cGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCa > 1:5322898/1‑70 (MQ=255) gCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCaaa > 1:559752/1‑71 (MQ=255) cgccctttatgcaccggcaatacaagcgatgttcccagcattgaggatttGATATGCCTTCTCATATCaa > 1:2390502‑M1/51‑70 (MQ=255) cgccctttatgcaccggcaatacaagcgatgttcccagcattgaggatttGATATGCCTTCTCATATCaa > 1:1830072‑M1/51‑70 (MQ=255) aCCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAAt < 1:3845750/70‑1 (MQ=255) aCCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATc > 1:1106888/1‑71 (MQ=255) aCCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATc > 1:4596053/1‑71 (MQ=255) ccGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATcc > 1:2033800/1‑71 (MQ=255) gTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCt > 1:2187735/1‑70 (MQ=255) gTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCt > 1:2109820/1‑70 (MQ=255) cccGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCaa < 1:2315501/70‑1 (MQ=255) cccGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCaa < 1:4820576/70‑1 (MQ=255) ccGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATg > 1:2860281/1‑71 (MQ=255) gACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCaaa > 1:2867967/1‑60 (MQ=255) gACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCaaa > 1:2564970/1‑60 (MQ=255) aCAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCt < 1:827753/70‑1 (MQ=255) cAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCaaa > 1:2242156/1‑58 (MQ=255) cAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTgg > 1:488793/1‑71 (MQ=255) aaCGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTggg < 1:77193/71‑1 (MQ=255) aaCGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTgg > 1:4463292/1‑70 (MQ=255) ggAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAAt > 1:223888/1‑55 (MQ=255) aaaTTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACAt < 1:369447/71‑1 (MQ=255) ttATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGc < 1:2810554/71‑1 (MQ=255) aTGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCt < 1:1332256/70‑1 (MQ=255) tGAGCATGACTATGAGGGAGCAGACGATACGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:2856962/71‑1 (MQ=255) gAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATg < 1:1000674/54‑1 (MQ=255) gAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:678111/70‑1 (MQ=255) aGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:916533/69‑1 (MQ=255) gCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACa < 1:1658159/61‑1 (MQ=255) gCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTa > 1:5159556/1‑70 (MQ=255) aTGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:3795154/66‑1 (MQ=255) aTGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTg > 1:2721981/1‑71 (MQ=255) aTGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTg > 1:1387519/1‑71 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGc < 1:801379/50‑1 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGc > 1:418683/1‑71 (MQ=255) gACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGcc > 1:5002050/1‑71 (MQ=255) aCTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGcc < 1:2256339/70‑1 (MQ=255) aCTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCg < 1:246222/71‑1 (MQ=255) tATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGc < 1:4328870/46‑1 (MQ=255) tATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:2009104/61‑1 (MQ=255) aTGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATg < 1:350188/44‑1 (MQ=255) aTGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTg > 1:15946/1‑71 (MQ=255) tGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTg > 1:4878989/1‑70 (MQ=255) gAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTgg < 1:5273861/46‑1 (MQ=255) gggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTg < 1:855060/56‑1 (MQ=255) ggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATaa < 1:1779387/71‑1 (MQ=255) ggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATaa < 1:3304635/71‑1 (MQ=255) ggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATaa < 1:286563/71‑1 (MQ=255) ggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATa > 1:3140027/1‑70 (MQ=255) gAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATaaa < 1:4919108/71‑1 (MQ=255) aGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAg < 1:1931941/71‑1 (MQ=255) gCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAAc < 1:1691024/44‑1 (MQ=255) cAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCg < 1:425085/47‑1 (MQ=255) ttgatatgagaaggcatatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCg > 1:2390502‑M2/21‑70 (MQ=255) ttgatatgagaaggcatatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCg > 1:1830072‑M2/21‑70 (MQ=255) cGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTa < 1:15810/71‑1 (MQ=255) cGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTa < 1:3990937/71‑1 (MQ=255) GATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAt < 1:4053806‑M1/71‑1 (MQ=255) GATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAt > 1:4627713‑M1/1‑71 (MQ=255) GATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAt > 1:4392407‑M1/1‑71 (MQ=255) ATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAtt > 1:929023‑M1/1‑71 (MQ=255) tatgagaaggcatatcAAATCCTCAATGCTGGGAACATCGCTTg > 1:702726‑M2/17‑44 (MQ=255) TATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCg < 1:2156708‑M1/40‑1 (MQ=255) ATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAtt < 1:5235176‑M1/69‑1 (MQ=255) tgagaaggcatatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAg < 1:54228‑M2/57‑1 (MQ=255) TGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGt < 1:188148‑M1/65‑1 (MQ=255) TGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCa > 1:3788415‑M1/1‑70 (MQ=255) TGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAg > 1:784516‑M1/1‑71 (MQ=255) TGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAg > 1:5338147‑M1/1‑71 (MQ=255) TGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAg > 1:3427570‑M1/1‑71 (MQ=255) gaaggcatatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGt < 1:2732760‑M2/51‑1 (MQ=255) cTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGt < 1:284902/49‑1 (MQ=255) cTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGt < 1:2347816/49‑1 (MQ=255) cTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCa > 1:4084928/1‑67 (MQ=255) cTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGAcc > 1:4156988/1‑71 (MQ=255) ttCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTa < 1:3060851/62‑1 (MQ=255) ttCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCg > 1:598985/1‑71 (MQ=255) tctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:601743/1‑40 (MQ=255) tctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:3331856/1‑40 (MQ=255) tctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCgg > 1:1688274/1‑71 (MQ=255) tctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCgg > 1:5071145/1‑71 (MQ=255) ctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGc < 1:462096/42‑1 (MQ=255) ctcATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCgg < 1:4785479/70‑1 (MQ=255) tcATATCAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:2133659/1‑38 (MQ=255) tcATATCAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:4367461/1‑38 (MQ=255) tcATATCAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:4367466/1‑38 (MQ=255) catatcAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:4070447‑M2/7‑37 (MQ=255) catatcAAATCCTCAATGCTGGGAACATCGCTTGTAt > 1:4076654‑M2/7‑37 (MQ=255) catatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCAc > 1:1815650‑M2/7‑71 (MQ=255) catatcAAATCCTCAATGCCGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCAc > 1:3025550‑M2/7‑71 (MQ=255) atatcAAATCCTCAATGCTGGGAACATCGCTTGTa > 1:4440323‑M2/6‑35 (MQ=255) tatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCt > 1:3843511‑M2/5‑71 (MQ=255) tatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCt > 1:3849693‑M2/5‑71 (MQ=255) tatcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGCTGCATAAAGGGCGTATTCAGACCGGCACCt < 1:44458‑M2/67‑1 (MQ=255) tcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCg > 1:4219617‑M2/3‑63 (MQ=255) tcAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTgg > 1:2577302‑M2/3‑71 (MQ=255) cAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTGAGACCGGCACCTgg > 1:4095316‑M2/2‑70 (MQ=255) aaaTCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCa > 1:139581/1‑64 (MQ=255) | CGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGG > W3110S.gb/4274034‑4274171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |