| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4464554 | 65 (1.110) | 4 (0.080) | 4/84 | NT | 6.1% | intergenic (+17/+28) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein |
| ? | W3110S.gb | = 4464568 | 69 (1.430) | intergenic (+31/+14) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein | |||||
Only 100 of 108 total aligned reads displayed.
AAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTC > W3110S.gb/4464499‑4464638 | aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:866297/70‑1 (MQ=255)aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt > 1:4958453/1‑70 (MQ=255)aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt > 1:2491642/1‑70 (MQ=255)aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:2723078/70‑1 (MQ=255)aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt > 1:2889169/1‑70 (MQ=255) aCGACCCGCAATTCATATCACAAGAATTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaaca > 1:2758602‑M2/1‑67 (MQ=255) aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacaggg > 1:2454251‑M2/1‑64 (MQ=255) ccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaac > 1:5176868‑M2/1‑62 (MQ=255) cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc < 1:1349412/71‑1 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt > 1:2087425/1‑71 (MQ=255) aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTa < 1:2838941/71‑1 (MQ=255) aTTCATATCACAAGAAGTATTTTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat > 1:2061905/1‑71 (MQ=255) aTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat < 1:3081233/71‑1 (MQ=255) aTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat > 1:3996595/1‑71 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaa < 1:1540835‑M2/56‑3 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat > 1:1814758/1‑71 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca < 1:306571/70‑1 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca < 1:4737255/70‑1 (MQ=255) atCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagg < 1:2953430‑M2/57‑7 (MQ=255) caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:4154822/47‑1 (MQ=255) caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:4198167/47‑1 (MQ=255) aagaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat > 1:1349226/1‑70 (MQ=255) agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga < 1:2220879/71‑1 (MQ=255) agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga < 1:2214522/71‑1 (MQ=255) gaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaaca < 1:3031165‑M2/48‑5 (MQ=255) gaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc < 1:545375/62‑1 (MQ=255) gaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc < 1:2656914/62‑1 (MQ=255) aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat < 1:4152113/57‑1 (MQ=255) aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgatg < 1:5039748/71‑1 (MQ=255) aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatg > 1:1625948/1‑68 (MQ=255) agTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacaggg > 1:2760146‑M2/1‑42 (MQ=255) gTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaaca < 1:4622890‑M2/45‑5 (MQ=255) gTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc < 1:3735519/70‑1 (MQ=255) aTCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcac > 1:538724/1‑70 (MQ=255) tCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcacca > 1:1263014/1‑71 (MQ=255) gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCa < 1:1853549/57‑1 (MQ=255) gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcaccac < 1:2192997/70‑1 (MQ=255) ttAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat > 1:315926/1‑59 (MQ=255) ttAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt < 1:1204147/71‑1 (MQ=255) aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGa > 1:1087924/1‑71 (MQ=255) aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGa > 1:1841222/1‑71 (MQ=255) aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcaccac > 1:511423/1‑66 (MQ=255) aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGa < 1:4400302/70‑1 (MQ=255) aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt > 1:2739225/1‑71 (MQ=255) aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt < 1:1862844/71‑1 (MQ=255) ttCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc < 1:4999763/51‑1 (MQ=255) tCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat > 1:1254595/1‑44 (MQ=255) ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCaaa > 1:548968/1‑52 (MQ=255) ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGtaccac > 1:3040717/1‑63 (MQ=255) ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcaccac > 1:1326255/1‑63 (MQ=255) cTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgct > 1:2619055/1‑71 (MQ=255) tCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt < 1:2435036/63‑1 (MQ=255) tCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt < 1:4139237/63‑1 (MQ=255) tCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctg > 1:1671403/1‑71 (MQ=255) aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt > 1:2794002/1‑61 (MQ=255) aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct < 1:4528469/71‑1 (MQ=255) aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct < 1:736867/71‑1 (MQ=255) tttCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgctg < 1:1612316/71‑1 (MQ=255) tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgctg > 1:3976280/1‑69 (MQ=255) tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGcc > 1:1125627/1‑71 (MQ=255) cccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGcc < 1:67839/70‑1 (MQ=255) ccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc < 1:4210319/71‑1 (MQ=255) cTGTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttc > 1:2012721‑M2/1‑19 (MQ=255) cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgcg > 1:3309699/1‑71 (MQ=255) tGTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgt < 1:4656745‑M2/71‑54 (MQ=255) gTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgtt < 1:3592422‑M2/71‑55 (MQ=255) gTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttctt > 1:2325517‑M2/1‑17 (MQ=255) gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc > 1:4107719/1‑70 (MQ=255) ttGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat < 1:2244489/40‑1 (MQ=255) ttGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCa < 1:4795558/71‑1 (MQ=255) tGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct > 1:685297/1‑61 (MQ=255) tGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc > 1:683099/1‑68 (MQ=255) gCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc > 1:1687905/1‑67 (MQ=255) gCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAg < 1:1679237/70‑1 (MQ=255) gCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAg < 1:4462138/70‑1 (MQ=255) ccTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGa < 1:104922/70‑1 (MQ=255) cTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGa > 1:1826929/1‑69 (MQ=255) cTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATc < 1:1870632/71‑1 (MQ=255) cTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATc < 1:4934173/71‑1 (MQ=255) cTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATc < 1:3121661/71‑1 (MQ=255) tGCACTCAGGTAACAGGGAACTTATCATCGCAAat < 1:5213457/35‑1 (MQ=255) tGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAt > 1:1155623/1‑69 (MQ=255) tGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAt > 1:1116190/1‑69 (MQ=255) gCACTCAGGTAACAGGGAACTTATCGTCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAg > 1:5031891/1‑71 (MQ=255) cACTCAGGTAACAGGGAACTTATCATCGCAAatga > 1:2839758/1‑35 (MQ=255) cACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCa < 1:3238729/69‑1 (MQ=255) cACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAgg < 1:2133704/71‑1 (MQ=255) aCTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg < 1:3720876/71‑1 (MQ=255) cTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg > 1:4949156/1‑70 (MQ=255) tCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg > 1:1792399/1‑69 (MQ=255) tCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg > 1:1366085/1‑69 (MQ=255) tCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg > 1:326624/1‑69 (MQ=255) tCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg > 1:3733821/1‑69 (MQ=255) aaaGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgct > 1:5155141/3‑49 (MQ=255) aGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGaa < 1:621614/69‑1 (MQ=255) ggTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAgg < 1:3448876/70‑1 (MQ=255) gTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGaa > 1:2252586/1‑67 (MQ=255) gTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAggg > 1:3544851/1‑70 (MQ=255) gTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGt > 1:2795467/1‑71 (MQ=255) tAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTc > 1:3166562/1‑71 (MQ=255) | AAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTC > W3110S.gb/4464499‑4464638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |