| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 457681 = | 52 (0.850) | 16 (0.270) | 8/96 | NT | 31.1% | coding (911/933 nt) | ybgK | predicted enzyme subunit |
| ? | minE | 981696 = | 20 (0.330) | coding (202/203 nt) | dicC | DNA‑binding transcriptional regulator | |||||
AATTTTCATTGTGCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/457701‑457681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGAT > minE/981696‑981760 gATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATAC > 1:2557310/2‑68 ATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGA < 1:5264732/70‑1 ATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTT > 1:1064855/1‑56 ATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGAT > 1:2239276/1‑41 ATTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTT < 1:4967640/36‑1 TTTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAG > 1:297011/1‑71 TTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGC > 1:2977298/1‑71 TTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGC > 1:3710344/1‑71 TTTCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGC > 1:3717041/1‑71 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTC > 1:915889/1‑71 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCT < 1:2236549/70‑1 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGC > 1:240379/1‑69 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGA > 1:2228061/1‑36 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGA > 1:3376426/1‑36 TCATTGTTCAACCGCCCCGCCCGCTTCGTCTTACGA > 1:5139085/1‑36 TGTTCAACCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATA > 1:2224193/1‑58 caaCCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCA < 1:2331662/67‑1 aaCCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACT < 1:2684647/40‑1 aCCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGAT > 1:2262783/2‑71 CCGCCCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCC > 1:4929906/1‑66 CCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAG < 1:15350/64‑1 AATTTTCATTGTGCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/457701‑457681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGCCCGCTTCGTCTTACGATATTCATCATAAACTTTGGGATCATACTGAAGCTCCCCGCCAGAT > minE/981696‑981760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |