New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 929154 | 82 (1.340) | 8 (0.170) +ATTTTATCAAT |
3/76 | NT | 11.8% | coding (10/1389 nt) | narU | nitrate/nitrite transporter |
? | minE | 957416 = | 73 (1.190) | intergenic (‑268/+94) | gadB/pqqL | glutamate decarboxylase B, PLP‑dependent/predicted peptidase |
CTATTTTTCTCATTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/929138‑929154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGATTATTATTT > minE/957416‑957428 ||||||||||| aTATTTTTCTCATTTTGATTTTATCAATTTGATTATTATT > 1:35109/2‑40 ATTTTTCTCATTTTGATTTTATCAATTTGATTATTATT > 1:4724002/1‑38 ATTTTTCTCATTTTGATTTTATCAATTTGATTATTATT > 1:850646/1‑38 TTTTTCTCATTTTGATTTTATCAATTTGATTATTATTT < 1:4478179/38‑1 TTTTTCTCATTTTGATTTTATCAATTTGATTATTATTT < 1:5356700/38‑1 TTTTCTCATTTTGATTTTATCAATTTGATTATTATTT > 1:1856502/1‑37 TTTTCTCATTTTGATTTTATCAATTTGATTATTATTT > 1:2531021/1‑37 TTTTCTCATTTTGATTTTATCAATTTGATTATTATTT > 1:2533141/1‑37 ||||||||||| CTATTTTTCTCATTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/929138‑929154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGATTATTATTT > minE/957416‑957428 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |