New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 1159168 = | 73 (1.190) | 7 (0.140) +CGATCAGTT |
3/80 | NT | 16.4% | coding (506/1221 nt) | astC | succinylornithine transaminase, PLP‑dependent |
? | minE | = 1751026 | 15 (0.240) | coding (189/1038 nt) | yfiF | predicted methyltransferase |
GGATATTCGTCATGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1159185‑1159168 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGGAAGATTCGCCGT < minE/1751026‑1751010 ||||||||| acATATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGCTGT > 1:1001604/3‑44 TATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTC < 1:1839226/36‑1 ATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGC < 1:3465543/37‑1 ATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGC < 1:3651272/37‑1 ATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGC < 1:5295598/37‑1 ATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGC < 1:5504604/37‑1 TTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGC > 1:4879847/1‑36 ||||||||| GGATATTCGTCATGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1159185‑1159168 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGGAAGATTCGCCGT < minE/1751026‑1751010 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |