| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2288200 = | 94 (1.530) | 4 (0.070) | 3/86 | NT | 5.2% | coding (661/1152 nt) | argE | acetylornithine deacetylase |
| ? | minE | 2288222 = | 64 (1.190) | coding (683/1152 nt) | argE | acetylornithine deacetylase | |||||
GTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2288274‑2288200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttatcACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCTTCTA > minE/2288222‑2288290 GTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT > 1:5298850/1‑71GTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT > 1:3170253/1‑71 TGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:1465583/71‑1 TGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:3869017/71‑1 AGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT > 1:3842506/1‑58 GGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT > 1:2080564/1‑58 GGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGG > 1:2636590/1‑56 GGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGG > 1:4203263/1‑56 GGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGG > 1:1335340/1‑56 GTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTA < 1:2416895/58‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:2070249/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:4637381/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:1765063/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:2990226/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:2983477/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:5326521/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:1857684/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:910130/56‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:2807855/55‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:316199/55‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:235516/55‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:3365708/55‑1 TTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:962011/55‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTT < 1:2725240/37‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:5591023/36‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:541884/36‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:5551615/36‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:4873645/36‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:2669710/36‑1 CGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGT < 1:1691400/36‑1 TAGTGATAACGTTCTTTCAGGTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAAC < 1:1100647/64‑1 TGATAACGTTCTTTCAGGTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCAT < 1:1321689/70‑1 TGATAACGTTCTTTCAGGTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCAT < 1:1690195/70‑1 TAACGTTCTTTCAGGTTATCGCTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTC < 1:2017691/71‑1 GTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCT > 1:974217/1‑71 TCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCTTCTA < 1:796330/71‑1 GTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2288274‑2288200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttatcACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCTTCTA > minE/2288222‑2288290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |