| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 412590 = | 16 (0.260) | 9 (0.180) | 3/82 | NT | 24.9% | intergenic (‑235/+54) | leuS/lnt | leucyl‑tRNA synthetase/apolipoprotein N‑acyltransferase |
| ? | minE | 2911774 = | 41 (0.800) | intergenic (+69/+137) | mgtA/yjgF | magnesium transporter/ketoacid‑binding protein | |||||
GCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCT > minE/412520‑412657 | gctacgcttatcaggcctacgtgattcctgcaatttattgaatttgttggccggataaggcatttacgccg < 1:5184338‑M1/1‑1 (MQ=255) tacgcttatcaggcctacgtgattcctgcaatttattgaatttgttggccggataaggcatttacgccGCa < 1:1182871‑M1/3‑1 (MQ=255) tacgcttatcaggcctacgtgattcctgcaatttattgaatttgttggccggataaggcatttacgccGCa < 1:4959696‑M1/3‑1 (MQ=255) tacgcttatcaggcctacgtgattcctgcaatttattgaatttgttggccggataaggcatttacgccGCa < 1:1901803‑M1/3‑1 (MQ=255) cgcttatcaggcctacgtgattcctgcaatttattgaatttgttggccggataaggcatttacgccGCa > 1:5076195‑M1/67‑69 (MQ=255) ttAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATc < 1:2033952/70‑1 (MQ=255) aGGAACAAAGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGc > 1:3087334/1‑71 (MQ=255) ggAACAAAGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGcc > 1:2898740/1‑71 (MQ=255) aaaGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGaaa > 1:2321233/1‑70 (MQ=255) aaaGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGaaa > 1:2247054/1‑70 (MQ=255) aaCGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATgg < 1:3641835/71‑1 (MQ=255) gcaatttattgaatttgttggccggataaggcatttacgccGCATcc < 1:3166951‑M1/6‑1 (MQ=255) gcaatttattgaatttgttggccggataaggcatttacgccGCATcc < 1:2635218‑M1/6‑1 (MQ=255) tCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATg > 1:4603936/1‑71 (MQ=255) ataGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCgg > 1:3816750/1‑70 (MQ=255) tattgttatccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCAc > 1:179359‑M1/30‑71 (MQ=255) tattgttatccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCAc < 1:1359697‑M1/42‑1 (MQ=255) ttgttatccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGa < 1:1471091‑M1/44‑1 (MQ=255) ttgttatccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGa < 1:548195‑M1/44‑1 (MQ=255) ttgttatccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGa < 1:591027‑M1/44‑1 (MQ=255) tAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGa > 1:286313/1‑71 (MQ=255) tAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGa > 1:3182209/1‑71 (MQ=255) gTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATg < 1:2020618/55‑1 (MQ=255) gTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATg < 1:85771/55‑1 (MQ=255) atccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaag > 1:2375641‑M1/23‑70 (MQ=255) atccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaag > 1:1035075‑M1/23‑70 (MQ=255) atccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaag > 1:5580942‑M1/23‑70 (MQ=255) aaCGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaag > 1:3138462/1‑69 (MQ=255) ccggataatgcactgatgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCAc < 1:2777510‑M1/42‑1 (MQ=255) cGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGatta > 1:3908051/1‑71 (MQ=255) cGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGatta > 1:2257496/1‑71 (MQ=255) aTGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAgg < 1:5368692/60‑1 (MQ=255) aTGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAgg < 1:1129977/60‑1 (MQ=255) aaaCGGCATCCGGTGAGCGTGCCGAAATATGGGATGTa > 1:3946207/1‑38 (MQ=255) tgccGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAgg > 1:1442381‑M1/5‑56 (MQ=255) aCGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa < 1:1053714/49‑1 (MQ=255) aCGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCt < 1:1401093/71‑1 (MQ=255) aCGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCt < 1:1220201/71‑1 (MQ=255) cGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCt < 1:2131610‑M1/68‑1 (MQ=255) | GCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTAAGTTAACGACCCGGGAGATGAAACGGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCT > minE/412520‑412657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |