| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 449684 = | 62 (1.010) | 10 (0.220) +GGCACGCTGTTC |
4/74 | NT | 17.0% | coding (654/2049 nt) | kdpB | potassium translocating ATPase, subunit B |
| ? | minE | = 1336512 | 68 (1.110) | coding (409/1122 nt) | gmd | GDP‑D‑mannose dehydratase, NAD(P)‑binding | |||||
ACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGC > minE/449614‑449751 | aCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAAtt > 1:3101669/1‑71 (MQ=255) cGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAAttt < 1:3699069/71‑1 (MQ=255) gCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATttcg < 1:5053006/71‑1 (MQ=255) acaGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATttcgttc > 1:4644216/1‑71 (MQ=255) caGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATttcgttcg > 1:2631312/1‑71 (MQ=255) gTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGt > 1:3433148/1‑71 (MQ=255) ccAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCg < 1:523921/70‑1 (MQ=255) ccAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGc < 1:238897/71‑1 (MQ=255) ccAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGc < 1:2412395/71‑1 (MQ=255) gTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgt > 1:580194/1‑71 (MQ=255) gTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgt < 1:1573361/71‑1 (MQ=255) gTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgt > 1:1304319/1‑71 (MQ=255) gTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgt < 1:3129734/71‑1 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATttcgttcg < 1:2303395/53‑1 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGc < 1:4676360/62‑1 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGc < 1:1277701/62‑1 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:3182613/1‑71 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:3143591/1‑71 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:4175838/1‑71 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:464894/1‑71 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:1191720/1‑71 (MQ=255) tAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtgtg > 1:103961/1‑71 (MQ=255) aaaaaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAAAttcgtt > 1:5524344/1‑50 (MQ=255) aaaaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGc > 1:3044628/1‑60 (MQ=255) aaaaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGt > 1:2924754/1‑62 (MQ=255) aaaaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTgcg > 1:1284336/1‑71 (MQ=255) aaaaGACGATAGTCAGGACAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTgc > 1:3490145/1‑70 (MQ=255) aaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGcc > 1:1641045/1‑71 (MQ=255) aGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGttt < 1:517700/54‑1 (MQ=255) aGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCt < 1:3407689/71‑1 (MQ=255) aGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCt < 1:2603968/71‑1 (MQ=255) gTCAGGTCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGc < 1:3062040/54‑1 (MQ=255) gTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGc < 1:4361184/54‑1 (MQ=255) gTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGc < 1:2672752/54‑1 (MQ=255) cAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtg > 1:1028022/1‑54 (MQ=255) cAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATcg > 1:311305/1‑71 (MQ=255) atcctgcaccagaccatagaacagcgtgccttcgttc < 1:2003842‑M1/7‑1 (MQ=255) tcctgcaccagaccatagaacagcgtgccTTCGTTCGGCGttt > 1:2985511‑M1/30‑43 (MQ=255) tcctgcaccagaccatagaacagcgtgccTTCGTTCGGCGttt > 1:2769780‑M1/30‑43 (MQ=255) tcctgcaccagaccatagaacagcgtgccTTCGTTCGGCGt > 1:61456‑M1/30‑41 (MQ=255) tcctgcaccagaccatagaacagcgtgccTTCGTTCGGCGt > 1:3677687‑M1/30‑41 (MQ=255) tcctgcaccagaccatagaacagcgtgccTTCGTTCGGCGt > 1:5379721‑M1/30‑41 (MQ=255) aGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATcgc > 1:1765900/1‑71 (MQ=255) aGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATcg > 1:4148827/1‑70 (MQ=255) gggCAATCAGCAGAATGGTCAGGGCAATttcgttcg < 1:3452859/36‑1 (MQ=255) gggCAATCAGCAGAATGGTCAGGGCAATttcgttcg < 1:3362585/36‑1 (MQ=255) gggCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATcgcg < 1:3427118/71‑1 (MQ=255) tgCAATCATCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTg < 1:1149878/42‑1 (MQ=255) ggCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCt < 1:1957379/50‑1 (MQ=255) ggCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCt < 1:668601/50‑1 (MQ=255) gcaccagaccatagaacagcgtgccTTCGTTCGGCGtttt > 1:1617481‑M1/26‑40 (MQ=255) cAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGtttgc > 1:1017830/1‑39 (MQ=255) cAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTg > 1:3232118/1‑41 (MQ=255) cAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCG‑TTTGCGTCGCtg > 1:2325576/1‑48 (MQ=39) caccagaccatagaacagcgttccTTCGTTCGGCgtttta < 1:3349998‑M1/16‑2 (MQ=255) caccagaccatagaacagcgtgccTTCGTTCGGCgtttta < 1:2059845‑M1/16‑2 (MQ=255) caccagaccatagaacagcgtgccTTCGTTCGGCGtttt < 1:5515702‑M1/15‑1 (MQ=255) tCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTcc < 1:3072302/56‑1 (MQ=255) tCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGatcatc > 1:4868052/1‑71 (MQ=255) agcagAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATcc > 1:2989166/1‑70 (MQ=255) cagAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGAt > 1:289149/1‑71 (MQ=255) aaTGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATcgcg < 1:148022/58‑1 (MQ=255) tGGTTAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGa < 1:1809065/71‑1 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCtg > 1:922704/1‑37 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAg > 1:4973404/1‑70 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGa < 1:3962751/71‑1 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGa < 1:3512729/71‑1 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTCTGCGCCTTCCACCAt > 1:1320092/1‑52 (MQ=255) tGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCACtg > 1:480407/1‑37 (MQ=255) gTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGaa < 1:4671758/70‑1 (MQ=255) gggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGtc < 1:504169/71‑1 (MQ=255) gggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGtc < 1:930952/71‑1 (MQ=255) ggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGtct < 1:2487015/71‑1 (MQ=255) ggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGtct > 1:3475882/1‑71 (MQ=255) ggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGtc < 1:4848223/70‑1 (MQ=255) cAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCg < 1:5623088/71‑1 (MQ=255) cAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCg > 1:679366/1‑71 (MQ=255) aaTTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGc > 1:2557799/1‑71 (MQ=255) aaTTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGc < 1:83580/71‑1 (MQ=255) aaTTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGc < 1:90199/71‑1 (MQ=255) aTTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCg < 1:5156109/53‑1 (MQ=255) ttcgttcgGCGTTTTGCGTCGCTGTGCGCCTTcca > 1:2461988/1‑35 (MQ=255) ttcgttcgGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGAt > 1:2146910/1‑53 (MQ=255) ttcgttcgGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGAt > 1:1382678/1‑53 (MQ=255) | ACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGC > minE/449614‑449751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |