| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 453549 | 45 (0.730) | 5 (0.080) | 3/96 | NT | 7.9% | intergenic (+96/+54) | phr/ybgH | deoxyribodipyrimidine photolyase, FAD‑binding/predicted transporter |
| ? | minE | 2708556 = | 72 (1.200) | intergenic (+94/‑196) | trpS/yhfZ | tryptophanyl‑tRNA synthetase/conserved hypothetical protein | |||||
GATGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCA > minE/453479‑453619 | gATGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATA < 1:3228340‑M1/71‑1 (MQ=255) gCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATAc > 1:2515992/1‑69 (MQ=255) gCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACg > 1:3949828/1‑70 (MQ=255) ggATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAgg > 1:642933/1‑71 (MQ=255) tGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCt < 1:107376/71‑1 (MQ=255) tGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACg < 1:2723034/57‑1 (MQ=255) cGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGAcgcg > 1:569786/1‑71 (MQ=255) cTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCa < 1:5168356/71‑1 (MQ=255) cTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCa < 1:1470684/71‑1 (MQ=255) ttATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTc > 1:3248053/1‑69 (MQ=255) aTCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATAc > 1:664377/1‑46 (MQ=255) aTCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGc > 1:1796233/1‑71 (MQ=255) ccAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCaa > 1:4139378/1‑67 (MQ=255) gCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCt < 1:2942525/49‑1 (MQ=255) gCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCt < 1:2243654/49‑1 (MQ=255) tACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGc < 1:2398575/63‑1 (MQ=255) tACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt > 1:3518111/1‑70 (MQ=255) cAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc < 1:3902978/69‑1 (MQ=255) tttGTGCAAATTCAATAAATTGCAGGAAATACGTAgg < 1:5482614/37‑1 (MQ=255) ttGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGc > 1:3092361/1‑56 (MQ=255) tgCAAAATCAATAAATTGCAGGAACGAtgcaggcctgataagcgtagcgcatcaggc > 1:3165227‑M1/1‑27 (MQ=255) gCAAAATCAATAAATTGCAGGAACGAtgtaggcctgataagcgtag > 1:156342‑M1/1‑26 (MQ=255) gCAAAATCAATAAATTGCAGGAACGAtgtaggcctgataagcgtag > 1:4311801‑M1/1‑26 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTg < 1:1882276/70‑1 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTg < 1:469339/70‑1 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGc > 1:3704886/1‑71 (MQ=255) aaaTTCAATAAATTGCAGGAAATACGTAGGCCTGATaa < 1:1712048/38‑1 (MQ=255) aaaTTCAATAAATTGCAGGAAATACGTAGGCCTGATaa < 1:290742/38‑1 (MQ=255) ttCAATAAATTGCAGGAAATACGTAGGCCTGATAAGa > 1:2792399/1‑37 (MQ=255) ttCAATAAATTGCAGGAAATACGTAGGCCTGATAAGa > 1:1779094/1‑37 (MQ=255) ttCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCgg > 1:3490295/1‑64 (MQ=255) tCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa > 1:2564631/1‑55 (MQ=255) tCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa > 1:108133/1‑55 (MQ=255) cAATAAATTGCAGGAAATACGTAGGCCTGATAAGa > 1:2901243/1‑35 (MQ=255) cAATAAATTGCAGGAAATACGTAGGCCTGATAAGa > 1:2407228/1‑35 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGCCGCGTCAAg > 1:2380836/1‑41 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAg > 1:2052126/1‑41 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAg > 1:5636674/1‑41 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAg > 1:2242683/1‑41 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1023345/47‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1872565/47‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt < 1:5446975/49‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTAtt < 1:1772202/71‑1 (MQ=255) aaaTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCg > 1:5413041/1‑57 (MQ=255) aaTTGCAGGAACGAtgtaggcctgataagcgtagcgca > 1:2297088‑M1/1‑14 (MQ=255) aaTTGCAGGAACGAtgtaggcctgataagcgtagcgca > 1:2595179‑M1/1‑14 (MQ=255) aaTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc > 1:1411317/1‑45 (MQ=255) aTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1704320/44‑1 (MQ=255) aTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa < 1:1819958/70‑1 (MQ=255) ttGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaaa > 1:4168872/1‑69 (MQ=255) ttGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa > 1:3083005/1‑69 (MQ=255) tGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc > 1:1146138/1‑45 (MQ=255) tGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc > 1:3792552/1‑45 (MQ=255) cAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTc < 1:4068127/71‑1 (MQ=255) aGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTcc < 1:3233539/71‑1 (MQ=255) aaaTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagc > 1:4814873/1‑71 (MQ=255) aTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgc > 1:2764064/1‑71 (MQ=255) aTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgc < 1:1415049/71‑1 (MQ=255) atgtaggcctgataagcgtagcgcatcaggcaattttgcttttatcatcactctgaaaccggggaaacccg < 1:4318942‑M1/71‑71 (MQ=255) atgtaggcctgataagcgtagcgcatcaggcaattttgcttttatcatcactctgaaaccggggaaacccg > 1:3936249‑M1/1‑1 (MQ=255) | GATGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCA > minE/453479‑453619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |