| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1764070 | 37 (0.600) | 6 (0.100) +G |
4/96 | NT | 11.3% | intergenic (‑227/+216) | rrsG/clpB | 16S ribosomal RNA/protein disaggregation chaperone |
| ? | minE | 2188894 = | 59 (0.960) | intergenic (‑36/+86) | nanA/nanR | N‑acetylneuraminate lyase/DNA‑binding transcriptional dual regulator | |||||
TTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGT > minE/1764002‑1764137 | tttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtctc < 1:4269755/70‑1 (MQ=255) ttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg > 1:54716/1‑71 (MQ=255) aGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 1:4923854/70‑1 (MQ=255) ggggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:2549746/71‑1 (MQ=255) gtgtGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgag < 1:5581171/71‑1 (MQ=255) gtgtGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgag < 1:3570479/71‑1 (MQ=255) tgtgCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 1:1413728/58‑1 (MQ=255) ataataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa > 1:1779913/1‑67 (MQ=255) ataataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc < 1:878841/71‑1 (MQ=255) taataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 1:3412013/52‑1 (MQ=255) taataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 1:4075095/65‑1 (MQ=255) ataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga > 1:644036/1‑52 (MQ=255) ataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag > 1:3601578/1‑51 (MQ=255) ataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 1:1646912/63‑1 (MQ=255) taCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgccg < 1:3090801/71‑1 (MQ=255) cTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg > 1:3687826/1‑40 (MQ=255) cTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg > 1:3408385/1‑40 (MQ=255) cTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcg > 1:5222304/1‑71 (MQ=255) cccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag < 1:284586/42‑1 (MQ=255) cccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAccc > 1:3151806/1‑58 (MQ=255) cccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg < 1:1149332/69‑1 (MQ=255) cccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg > 1:1445184/1‑69 (MQ=255) ccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg > 1:4314802/1‑71 (MQ=255) cGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCggcggc > 1:133082/1‑71 (MQ=255) cTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc > 1:5289004/1‑62 (MQ=255) cTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt < 1:4975173/71‑1 (MQ=255) cTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt < 1:4020207/71‑1 (MQ=255) cAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc < 1:3338571/52‑1 (MQ=255) agagTCAAGCATTTCTTTGCTTTTCTCTGTTgaga > 1:5324118/1‑35 (MQ=255) agagTCAAGCATTTCTTTGCTTTTCTCTGTTgaga > 1:2418164/1‑35 (MQ=255) gTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:2379438/39‑1 (MQ=255) gTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:4427858/39‑1 (MQ=255) aaGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgtt < 1:3480183/71‑1 (MQ=255) tatTTCTTTGCTTTTCTgtatacctttatacctgt < 1:1827089‑M1/34‑19 (MQ=255) cATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt > 1:1628417/1‑61 (MQ=255) tttCTTTGCTTTTCTgtatacctttatacctgtta > 1:2672640‑M1/1‑15 (MQ=255) tttCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg < 1:3580178/53‑1 (MQ=255) ttCTTTGCTTTTCTgtatacctttatacctgttatac < 1:1341399‑M1/37‑24 (MQ=255) ttCTTTGCTTTTCTgtatacctttatacctgttatac < 1:5232726‑M1/37‑24 (MQ=255) tCTTTGCTTTTCTgtatacctttatacctgttatac > 1:3079751‑M1/1‑13 (MQ=255) tCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc > 1:1023875/1‑45 (MQ=255) tCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc > 1:2282379/1‑45 (MQ=255) tCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGc > 1:3168743/1‑60 (MQ=255) tCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCg > 1:4362407/1‑70 (MQ=255) cTTTGCTTTTCTgtatacctttatacctgttatacca > 1:1066489‑M1/1‑12 (MQ=255) ttGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCg > 1:3725432/1‑59 (MQ=255) cTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAgt < 1:4660151/71‑1 (MQ=255) ttCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg < 1:1441988/46‑1 (MQ=255) ttCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAgtggt > 1:4021730/1‑71 (MQ=255) | TTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGT > minE/1764002‑1764137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |