| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2049242 = | 62 (1.010) | 12 (0.240) +TCTTTTCCT |
4/80 | NT | 19.9% | coding (1113/2841 nt) | glnE | fused deadenylyltransferase and adenylyltransferase for glutamine synthetase |
| ? | minE | = 2576489 | 57 (0.930) | coding (1610/1650 nt) | treF | cytoplasmic trehalase | |||||
TTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAA > minE/2049185‑2049310 | ttCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAg > 1:4876192/1‑71 (MQ=255) tcgtcgTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCaa > 1:4470345/1‑62 (MQ=255) cgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGtt < 1:3278183/63‑1 (MQ=255) aaTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTc > 1:2617200/1‑50 (MQ=255) aaTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtttt > 1:5581905/1‑71 (MQ=255) aTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtttt < 1:2873117/70‑1 (MQ=255) aTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtttt < 1:2104746/70‑1 (MQ=255) aTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtttt < 1:1582820/70‑1 (MQ=255) cTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCaa > 1:33117/1‑50 (MQ=255) cTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAg > 1:2805444/1‑70 (MQ=255) tttGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGa > 1:1447803/1‑70 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAg > 1:3449275/1‑69 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGc < 1:2068171/70‑1 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCa < 1:4578796/71‑1 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCa < 1:3054124/71‑1 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCa < 1:2665834/71‑1 (MQ=255) cagcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCa < 1:628548/71‑1 (MQ=255) agcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGc < 1:3770544/69‑1 (MQ=255) gcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCa < 1:4623678/42‑1 (MQ=255) gcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCa < 1:5549938/42‑1 (MQ=255) gcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGt < 1:801373/47‑1 (MQ=255) gcagGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAg > 1:3337005/1‑67 (MQ=255) gTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCa < 1:774065/65‑1 (MQ=255) gTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATg > 1:1310251/1‑69 (MQ=255) ttttCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAg < 1:1936222/65‑1 (MQ=255) tttGCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTGAGAAAGCAg < 1:329619/64‑1 (MQ=255) tttCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTc > 1:1679017/1‑55 (MQ=255) tttCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGc > 1:2695804/1‑71 (MQ=255) tttCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGc > 1:5280807/1‑71 (MQ=255) tCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGa < 1:5612607/63‑1 (MQ=255) ccAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATc > 1:4282712/1‑46 (MQ=255) ccAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATc > 1:1200956/1‑46 (MQ=255) cgccgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAAt > 1:125777/1‑71 (MQ=255) cgccgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAAt > 1:2833704/1‑71 (MQ=255) acggcgtaccacacaggaaaagaTCGCAATTGTTc < 1:5025752‑M1/12‑1 (MQ=255) acggcgtaccacacaggaaaagaTCGCAATTGTTc < 1:3306521‑M1/12‑1 (MQ=255) acggcgtaccacacaggaaaagaTCGCAATTGTTCAg > 1:5639603‑M1/24‑37 (MQ=255) acggcgtaccacacaggaaaagaTCGCAATTGTTCAg > 1:2040974‑M1/24‑37 (MQ=255) acggcgtaccacacaggaaaagaTCGCAATTGTTCAGcag > 1:1943789‑M1/24‑39 (MQ=255) gccgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGc < 1:3674487/67‑1 (MQ=255) cggcgtaccacacaggaaaagaTCGCAATTGTTCAGc < 1:3481960‑M1/15‑1 (MQ=255) cggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:880456‑M1/16‑1 (MQ=255) cggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:3135694‑M1/16‑1 (MQ=255) cggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:1578857‑M1/16‑1 (MQ=255) ggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:1122897‑M1/16‑1 (MQ=255) ggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:5157647‑M1/16‑1 (MQ=255) ggcgtaccacacaggaaaagaTCGCAATTGTTCAGCa < 1:2387576‑M1/16‑1 (MQ=255) cgcAGGAACAGATACGCCACTCTCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGc < 1:4346548/65‑1 (MQ=255) cgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGc < 1:2042930/65‑1 (MQ=255) cgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGc < 1:2735519/65‑1 (MQ=255) gcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGt > 1:2076862/1‑39 (MQ=255) gcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGt > 1:5490963/1‑39 (MQ=255) gcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGt > 1:4307729/1‑39 (MQ=255) cAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCa > 1:3305495/1‑43 (MQ=255) aGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGc < 1:4541156/48‑1 (MQ=255) aGGAACAGAAACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGc < 1:1114310/48‑1 (MQ=255) ggAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGa < 1:3412669/50‑1 (MQ=255) ggAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCt > 1:833740/1‑70 (MQ=255) gAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt < 1:2974294/50‑1 (MQ=255) gAAAAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTg > 1:4683718/1‑70 (MQ=255) aaCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAg < 1:261650/71‑1 (MQ=255) aaCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAg < 1:1560102/71‑1 (MQ=255) aCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGa > 1:1343385/1‑47 (MQ=255) aCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGa > 1:5276504/1‑47 (MQ=255) aCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGc > 1:4400549/1‑71 (MQ=255) aCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGc > 1:4407279/1‑71 (MQ=255) cAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCa < 1:4285179/37‑1 (MQ=255) cAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCa < 1:2365098/37‑1 (MQ=255) cAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCt < 1:4867464/53‑1 (MQ=255) cAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGgcg > 1:1510952/1‑64 (MQ=255) aGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGgcgc > 1:2946489/1‑64 (MQ=255) gATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGtt > 1:4213082/1‑71 (MQ=255) aTACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCaa > 1:4828950/1‑56 (MQ=255) aTACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTg > 1:35901/1‑71 (MQ=255) tACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAAGCAGCTCGGCAATGGCGCTGAGCGTTgg < 1:1101306/71‑1 (MQ=255) aCGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTgg > 1:753911/1‑70 (MQ=255) aCGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTgg > 1:4934926/1‑70 (MQ=255) aCTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGa < 1:4044664/36‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCTGAt < 1:1105792/36‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt < 1:1014095/36‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt < 1:2992773/36‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt < 1:3149452/36‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCg < 1:1191996/44‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGt < 1:111793/68‑1 (MQ=255) cTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGt < 1:3966019/68‑1 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATg < 1:3889712/36‑1 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCt > 1:5571349/1‑41 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCt > 1:1405034/1‑41 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCt > 1:4007144/1‑41 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTaa < 1:2975525/69‑1 (MQ=255) tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTa > 1:3808124/1‑68 (MQ=255) | TTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAA > minE/2049185‑2049310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |