| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 18241 | 79 (1.290) | 61 (0.990) | 32/98 | NT | 54.2% | intergenic (+80/+252) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 1502766 = | 24 (0.390) | intergenic (‑139/‑781) | lrhA/yfbQ | DNA‑binding transcriptional repressor/predicted aminotransferase | |||||
Only 100 of 122 total aligned reads displayed.
TGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCAT > minE/1502698‑1502836 | tGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaa > 1:2304777/1‑70 (MQ=255) tAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaaaaa < 1:4293559/71‑1 (MQ=255) gtgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaaaaaa < 1:323262/68‑1 (MQ=255) tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCgg > 1:3539203/1‑70 (MQ=255) tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:4172342/1‑71 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTca < 1:5137758‑M2/14‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTca > 1:2263577‑M2/58‑71 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaa < 1:2905206‑M2/4‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaa < 1:2093994‑M2/4‑1 (MQ=255) ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaaaa < 1:1605871/59‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaactcagtaagttggcagcatccccAAAAAAGCGACTcaca < 1:4669689‑M2/16‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTcaca < 1:5532234‑M2/16‑1 (MQ=255) ctcaaaaccaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTcc > 1:4277504‑M2/48‑70 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTca < 1:3718766‑M2/14‑1 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaat > 1:4669084‑M2/46‑49 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaat > 1:476015‑M2/46‑49 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaat > 1:1108891‑M2/46‑49 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaat > 1:4978695‑M2/46‑49 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaat > 1:2571641‑M2/46‑49 (MQ=255) taaaatcaccatcatacactaaatcagtaagttggcagcattaccgaaa > 1:4644038‑M2/46‑49 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:5080790/1‑55 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:2752403/1‑55 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:32030/1‑55 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGt < 1:5560147/70‑1 (MQ=255) caaaaacaccatcatacgctaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGt > 1:1127131‑M2/46‑70 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcatcatcaccaaaa < 1:4236710‑M2/4‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaaa < 1:1868028‑M2/5‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaa > 1:832507‑M2/45‑48 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaa < 1:532723‑M2/4‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaa > 1:4476378‑M2/45‑48 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGa > 1:3784224‑M2/45‑54 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGa > 1:3664927‑M2/45‑54 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACAt < 1:1759859‑M2/17‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGtt < 1:26482‑M2/26‑1 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTtat < 1:283277‑M2/28‑1 (MQ=255) aTCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaaa < 1:3562992/46‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTtat > 1:5568600‑M2/43‑70 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:758001‑M2/42‑71 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:4247412‑M2/42‑71 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGc > 1:1289228‑M2/41‑48 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGc > 1:3693579‑M2/41‑48 (MQ=255) accatcatacactaaatcagtaagttggcagcattaccgaaa > 1:2533932‑M2/39‑42 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTtat < 1:3977412‑M2/28‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACAt < 1:4545836‑M2/17‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACAt < 1:259661‑M2/17‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACAt < 1:3521058‑M2/17‑1 (MQ=255) acatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGATATAata > 1:4486248‑M2/35‑65 (MQ=255) catacactaaatcagtaagttggcagcatcaccAAAAAAGCGACt > 1:5540334‑M2/34‑45 (MQ=255) cGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTcac > 1:1752772/1‑48 (MQ=255) cGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTcac > 1:4100727/1‑48 (MQ=255) cGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTca > 1:4343002/1‑47 (MQ=255) atacactaaatcagtaagttggcagcatcaccAAAAAAGCAAc < 1:4599909‑M2/11‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccAAAAAAGCGACtct < 1:3979226‑M2/14‑2 (MQ=255) gACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCgg < 1:2126615/41‑2 (MQ=255) gACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGc > 1:552433/1‑64 (MQ=255) acactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:4977797‑M2/31‑69 (MQ=255) aCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:5350455/1‑69 (MQ=255) cactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTa < 1:2152608‑M2/41‑1 (MQ=255) cGAAAGTAAAAATGCATATGAGTTGCACTAAAAACGCGCCTCACATTGTTCCGTTATAATGCCTGAAg > 1:5458830/1‑68 (MQ=255) cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg < 1:2998835/71‑1 (MQ=255) aaatcagtaagttggcagcatcaccAAAAAAGCGACTca < 1:5675822‑M2/14‑1 (MQ=255) aaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:1106823‑M2/26‑55 (MQ=255) aaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATca > 1:5150655‑M2/26‑71 (MQ=255) aatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATca < 1:5482672‑M2/46‑1 (MQ=255) atcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTTTAATGCCTg < 1:5179219‑M2/36‑1 (MQ=255) atcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:809700‑M2/36‑1 (MQ=255) atcagtaagtgggcagcatcaccAAAAAAGCGACTCACAt < 1:1350231‑M2/17‑1 (MQ=255) cagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg > 1:5692829‑M2/22‑70 (MQ=255) cagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg > 1:3568152‑M2/22‑70 (MQ=255) agttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatata > 1:442359‑M2/17‑71 (MQ=255) agttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatata < 1:2765492‑M2/55‑1 (MQ=255) agttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatat < 1:1391626‑M2/54‑1 (MQ=255) gttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:4316766‑M2/16‑45 (MQ=255) gttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:3358923‑M2/16‑45 (MQ=255) atatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:3208852/50‑1 (MQ=255) atatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATc < 1:3736932/71‑1 (MQ=255) atatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATc < 1:3730201/71‑1 (MQ=255) tggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTtat < 1:2320338‑M2/28‑1 (MQ=255) tatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTtat < 1:5375921/41‑1 (MQ=255) tatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:5366402/49‑1 (MQ=255) ggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg > 1:4091664‑M2/13‑61 (MQ=255) gcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:1078395‑M2/12‑41 (MQ=255) cagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCa < 1:5058608‑M2/61‑1 (MQ=255) cagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCa < 1:2688104‑M2/61‑1 (MQ=255) gcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAgg > 1:1392882‑M2/9‑71 (MQ=255) ttGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAggg < 1:2805055/71‑1 (MQ=255) catcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:1282341‑M2/59‑1 (MQ=255) atcaccAAAAAAGCGACTCACATTGTTCCGTTATAAt < 1:2598169‑M2/31‑1 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGAt > 1:4818265/1‑71 (MQ=255) caccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:5023204‑M2/59‑1 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGcc > 1:336880‑M2/4‑37 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:3504940‑M2/36‑1 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa > 1:3622903‑M2/4‑54 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa > 1:1954871‑M2/4‑54 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa > 1:410064‑M2/4‑54 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAgg > 1:2018957‑M2/4‑66 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:707061‑M2/4‑71 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:4296075‑M2/4‑71 (MQ=255) cAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGa < 1:3153955‑M2/50‑1 (MQ=255) aaaaaaGCGACTCACATTGTTCCGTTATAATGCCTGATGTAGATCACAGAATATATCTTCAGGGATCGCat < 1:1036864/71‑1 (MQ=255) | TGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCAT > minE/1502698‑1502836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |