| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 453576 | 38 (0.620) | 13 (0.310) +GCGCATCAGGCATCG |
3/68 | NT | 33.2% | intergenic (+123/+27) | phr/ybgH | deoxyribodipyrimidine photolyase, FAD‑binding/predicted transporter |
| ? | minE | = 2207536 | NA (NA) | intergenic (‑226/+204) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter | |||||
GTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGAC > minE/2207485‑2207605 | gTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTa < 1:4044654/71‑1 (MQ=31) gTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGc > 1:4583685/1‑71 (MQ=34) ggCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGAcc > 1:517147/1‑70 (MQ=35) cTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACg > 1:2793974/1‑71 (MQ=34) tGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGa < 1:1803303/64‑1 (MQ=35) tGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGa < 1:1875305/64‑1 (MQ=35) tGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGa < 1:4490673/64‑1 (MQ=35) aTAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGtt < 1:5105752/71‑1 (MQ=34) tAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTaaa > 1:335339/1‑49 (MQ=38) tAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTa < 1:3094962/71‑1 (MQ=34) tAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTa > 1:4428779/1‑71 (MQ=34) gCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg < 1:5597479/71‑1 (MQ=34) cGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg < 1:4649330/70‑1 (MQ=35) gTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg > 1:2929685/1‑69 (MQ=35) gTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTa < 1:1092571/71‑1 (MQ=34) gcGCATCAGGCAACGGCTGCCGGATGCGGCGTAAAc < 1:2458765/35‑1 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATg > 1:926341/1‑57 (MQ=35) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGc > 1:5513347/1‑71 (MQ=34) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGc > 1:1588252/1‑71 (MQ=34) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGc > 1:1342434/1‑71 (MQ=34) cATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGcc > 1:1794001/1‑71 (MQ=34) aaTCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTa < 1:5329777/53‑1 (MQ=25) ctggCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCg < 1:5358808/38‑1 (MQ=255) aCGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGAc > 1:3626762/1‑71 (MQ=34) | GTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGAC > minE/2207485‑2207605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |