| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 183922 = | 64 (0.870) | 68 (1.110) +TTATAACA |
14/80 | NT | 59.5% | intergenic (+8/‑29) | rnhB/dnaE | ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit |
| ? | minE | = 296824 | 47 (0.640) | intergenic (+125/‑28) | cof/ybaO | thiamin pyrimidine pyrophosphate hydrolase/predicted DNA‑binding transcriptional regulator | |||||
Only 100 of 146 total aligned reads displayed.
CCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCA > minE/183856‑183985 | ccGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCga < 1:3535403/71‑1 (MQ=255) aaCACCATCGGCGCAGCTTTGGGCCTGTCAAACGCTCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGAt < 1:862582/71‑1 (MQ=255) acCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTaa < 1:4082210/71‑1 (MQ=255) cATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAg > 1:3426783/1‑70 (MQ=255) cATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAg > 1:424945/1‑70 (MQ=255) cGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTaaa > 1:2615280/1‑71 (MQ=255) cgcAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCg < 1:919071/71‑1 (MQ=255) cTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:1913292/68‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:2769830/70‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:2872173/70‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:3478439/70‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:4087284/70‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:55363/70‑1 (MQ=255) cTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCgg > 1:4595965/1‑59 (MQ=255) cTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:3490959/1‑71 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGt > 1:5178519/1‑47 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTaaa > 1:3320519/1‑50 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAAcc > 1:2901223/1‑52 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAAcc > 1:3136519/1‑52 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAAcc > 1:19929/1‑52 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAAcc > 1:1335194/1‑52 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg < 1:3522869/70‑1 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg > 1:538344/1‑70 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg < 1:1427113/70‑1 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg > 1:1901712/1‑70 (MQ=255) cgcgCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAAcc < 1:4014721/71‑1 (MQ=255) cgcTCTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAAcc < 1:3585802/69‑1 (MQ=255) tGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTc > 1:43496/1‑71 (MQ=255) tGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTc > 1:801052/1‑71 (MQ=255) gggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:3524224/1‑71 (MQ=255) gggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:938242/1‑71 (MQ=255) gggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:2564412/1‑71 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAg > 1:4335790‑M1/24‑35 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAg > 1:817036‑M1/24‑35 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAg > 1:7083‑M1/24‑35 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAg > 1:490216‑M1/24‑35 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTaaa < 1:3912262‑M1/16‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTaaa > 1:4719400‑M1/24‑39 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:2626822‑M1/24‑37 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:4053862‑M1/24‑37 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:2439702‑M1/24‑37 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa > 1:2221212‑M1/24‑45 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:3906299‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:1543414‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:4859672‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:2141294‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:2794837‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa > 1:3243646‑M1/24‑45 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:2842002‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:559301‑M1/22‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa > 1:2956282‑M1/24‑45 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:2169524‑M1/24‑51 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:4833395‑M1/24‑51 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:5092195‑M1/24‑51 (MQ=255) ggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGaa > 1:2798335/1‑60 (MQ=255) ggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:1811920/1‑70 (MQ=255) aaataaaattaaaatgttataaGTCGAGATTAAGTAAACCg > 1:4526709‑M1/23‑41 (MQ=255) aaataaaattaaaatgttataaGTCGAGATTAAGTAAACCg > 1:4540856‑M1/23‑41 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:319079‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1723127‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1469896‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:3831709‑M1/22‑53 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:4188827‑M1/22‑53 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:1214506‑M1/21‑48 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:502910‑M1/21‑48 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAAc < 1:2287012‑M1/17‑1 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1020477‑M1/20‑45 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1591346‑M1/20‑45 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:1037517‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:244568‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3280895‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:5016387‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:4383680‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:5012660‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:4554492‑M1/20‑47 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:2731405/39‑1 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:3671176/39‑1 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:377952/39‑1 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:4009680/39‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAACCCGGa < 1:4247669‑M1/21‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg < 1:3873147‑M1/26‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa < 1:5031776‑M1/27‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCt < 1:794501‑M1/25‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1993482‑M1/18‑43 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:1156758‑M1/28‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:2527191‑M1/28‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:1640363‑M1/28‑1 (MQ=255) gCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAAt > 1:1641911/1‑39 (MQ=255) gCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAAt > 1:4336379/1‑39 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt > 1:3055466‑M1/16‑46 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:242823‑M1/33‑2 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTac > 1:1347424/1‑62 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTac > 1:4904827/1‑62 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCggg > 1:2846629/1‑71 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:3390215‑M1/31‑1 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:1546080‑M1/31‑1 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:1049092‑M1/31‑1 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:864526‑M1/31‑1 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:4125230‑M1/31‑1 (MQ=255) aatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:3757661‑M1/31‑1 (MQ=255) | CCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCA > minE/183856‑183985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |