| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 207434 = | NA (NA) | 5 (0.090) | 3/94 | NT | NA | noncoding (2851/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | minE | 207455 = | NA (NA) | noncoding (2872/2904 nt) | rrlH | 23S ribosomal RNA | |||||
AAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/207506‑207434‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGAT > minE/207455‑207523 AAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCG > 1:1456616/1‑71 AAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGC < 1:1226885/71‑1 AAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGC < 1:251406/71‑1 AACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT < 1:727790/71‑1 AACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:2298643/1‑71 ACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1969299/1‑70 ACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1867381/1‑70 ACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1539864/1‑70 ACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1571995/1‑70 ACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:757068/1‑70 ACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1928644/1‑70 CAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:1430194/1‑69 CAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCG > 1:3120899/1‑67 GGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:2517239/1‑62 GGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGATGCGCT > 1:715438/1‑62 GGCGTTGTAAGGTTAAGCCTCACGGGTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGC < 1:1823878/61‑1 GCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT > 1:2849942/1‑61 CTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT < 1:620104/44‑1 GGTTAGCTCAACGCATCGCTGCGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGC > 1:1108666/1‑71 AGCTCAACGCATCGCTGCGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTT > 1:631407/1‑71 CATCGCTGCGCTAACCGGTACTAATGAACCTTGAGGCTTAACCT > 1:1593530/1‑44 CATCGCTGCGCTAACCGGTACTAATGAACCGTGAGGCTTAACCT > 1:1756145/1‑44 CATCGCTGCGCTAACCGGTACTAATGAACCGTGAGGCTTAACCT > 1:88921/1‑44 GCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCAGTTTTGGCGGATGAGAGAAG < 1:3462240/70‑1 GCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAG > 1:1497371/1‑48 GCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAG > 1:2245075/1‑48 GCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAG > 1:1907971/1‑48 GCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAG > 1:1785183/1‑48 CTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGAT > 1:2758955/1‑71 TAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCG < 1:1916297/57‑1 AAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/207506‑207434‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGAT > minE/207455‑207523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |