| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 603740 | 34 (0.560) | 3 (0.070) | 3/72 | NT | 9.2% | intergenic (+22/‑188) | ycaD/ycaM | predicted transporter/predicted transporter |
| ? | minE | = 603748 | 35 (0.790) | intergenic (+30/‑180) | ycaD/ycaM | predicted transporter/predicted transporter | |||||
ATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/603660‑603740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcagagtgtgaaACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCGTTG < minE/603748‑603679 ATTTGCTGATGGTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:1973849/1‑70 TTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCA < 1:1027271/67‑1 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:3042226/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:2679138/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:2712354/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:2848979/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:1905621/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:1586389/1‑68 TTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:338348/1‑68 TGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAG < 1:531405/70‑1 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTG < 1:3439495/71‑1 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGT > 1:3218166/1‑70 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGT > 1:1105425/1‑70 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGT > 1:2636047/1‑70 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGT > 1:2056434/1‑70 ATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGT > 1:3019202/1‑70 GCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAA > 1:3215848/1‑71 AACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAACAGTAAGTT > 1:3037998/1‑71 CGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG < 1:1331064/48‑1 CGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG < 1:3638392/48‑1 CGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG < 1:193467/48‑1 CCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAA > 1:3022876/1‑45 CCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAA > 1:3072931/1‑45 CGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAACAGTAAGTTCACAC < 1:2292466/71‑1 GTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAACAGTAAGTTCACACTC < 1:261908/71‑1 CATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAG > 1:833928/1‑46 CATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAG > 1:856431/1‑46 CATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAG > 1:3291364/1‑46 CGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:3370410/1‑37 CGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:2623273/1‑37 CGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:1254514/1‑37 CGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:1243042/1‑37 CGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAG > 1:3826400/1‑37 tGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTG < 1:809911/42‑1 CGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTG < 1:3740389/43‑1 CGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTG < 1:1874054/43‑1 CGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTG < 1:1935546/43‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:389451/35‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:3397278/35‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:2377203/35‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:2630821/35‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:704739/35‑1 TTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGA < 1:1094894/35‑1 AAGCAGAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGT < 1:1809705/71‑1 AGAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGT < 1:1645773/67‑1 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGAC < 1:2082553/71‑1 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGAC < 1:417678/71‑1 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGG > 1:2516306/1‑63 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGG > 1:3805989/1‑63 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGG > 1:3309143/1‑63 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGG > 1:2553357/1‑63 GAGTGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGG > 1:1893273/1‑63 TGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGA > 1:505820/1‑67 TGTGAAACAGTAAGTTCACACTCTGCTTGAATTCATT < 1:2468463/37‑1 TGAAACATTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTT < 1:79811/54‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCG > 1:1229502/1‑71 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATG > 1:3052958/1‑64 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCG < 1:2436218/60‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCG < 1:422514/60‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTT < 1:3312765/54‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTT < 1:554127/54‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTT < 1:2243105/54‑1 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACG > 1:3707360/1‑50 TGAAACAGTAAGTTCACACTCTGCTTGAATTCATTTAC > 1:2399058/1‑38 AAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCGTT > 1:1673485/1‑71 AAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTC > 1:1470485/1‑54 AAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTC > 1:1356863/1‑54 AAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTC > 1:1398487/1‑54 AAACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTC > 1:3521059/1‑54 AACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCGTTG < 1:1974210/71‑1 AACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCGTTG < 1:3178060/71‑1 ATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/603660‑603740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcagagtgtgaaACAGTAAGTTCACACTCTGCTTGAATTCATTTACACGTGAGCAACGGGTTTCGGCGTATGACCGGCGTTG < minE/603748‑603679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |