| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2749095 = | 70 (1.140) | 7 (0.130) | 3/90 | NT | 10.2% | coding (1168/1332 nt) | secY | preprotein translocase membrane subunit |
| ? | minE | 2749115 = | 60 (1.090) | coding (1188/1332 nt) | secY | preprotein translocase membrane subunit | |||||
CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2749169‑2749095‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTC > minE/2749115‑2749182 CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA > 1:940148/1‑71CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA > 1:935728/1‑71CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA < 1:672700/71‑1CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA < 1:1742153/71‑1CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA < 1:3474645/71‑1CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCA < 1:3396827/71‑1CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATAACGCA < 1:1309143/71‑1 TAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATG < 1:2720295/71‑1 TAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATG < 1:2639742/71‑1 TAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATG < 1:2466144/71‑1 TAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATG < 1:2089249/71‑1 TAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCAT > 1:447858/1‑70 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA > 1:2559486/1‑39 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA > 1:1163291/1‑39 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA > 1:52617/1‑39 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA > 1:3798727/1‑39 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCA > 1:2546882/1‑35 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCA > 1:128515/1‑35 ACCGAAGTAGAACGGTACTTTCATTGCATCACGCA > 1:2075117/1‑35 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCTCACT < 1:2013684/50‑1 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCT < 1:3574245/46‑1 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCT < 1:2051164/46‑1 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCT < 1:3152122/46‑1 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCT < 1:834948/46‑1 TTCATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCT < 1:1561874/46‑1 CATTGCATCACGCATGAAAGTACCGTTCTACTTCGGTGGGACCTCA > 1:1684224/1‑46 GAAAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCT > 1:347306/1‑70 AAAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTC > 1:447271/1‑70 AAAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTC < 1:560036/70‑1 CATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2749169‑2749095‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTC > minE/2749115‑2749182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |