| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 401088 = | 97 (1.580) | 5 (0.090) | 3/88 | NT | 7.1% | coding (448/1212 nt) | dacA | D‑alanyl‑D‑alanine carboxypeptidase |
| ? | minE | 401124 = | 46 (0.850) | coding (412/1212 nt) | dacA | D‑alanyl‑D‑alanine carboxypeptidase | |||||
AAGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGA > minE/401054‑401193 | aaGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:1651398/1‑71 (MQ=255)aaGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:1224971/1‑71 (MQ=255)aaGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:1233039/1‑71 (MQ=255)aaGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:2380468/1‑71 (MQ=255)aaGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:3564008/1‑71 (MQ=255) gCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTg > 1:542566/1‑69 (MQ=255) aacaaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGt > 1:567318/1‑71 (MQ=255) aacaaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGt > 1:2146329/1‑71 (MQ=255) aacaaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGt < 1:3428343/71‑1 (MQ=255) acaaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGtt < 1:831214/71‑1 (MQ=255) caaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGtt > 1:756586/1‑70 (MQ=255) caaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGtt > 1:2545220/1‑70 (MQ=255) caaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGtt > 1:1304704/1‑70 (MQ=255) caaAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGtt > 1:1198192/1‑70 (MQ=255) aaaaGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTaa > 1:3001762/1‑71 (MQ=255) aaaaGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTaa < 1:3764615/71‑1 (MQ=255) cGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACcg < 1:2396881/71‑1 (MQ=255) tCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACcgcg > 1:3564025/1‑71 (MQ=255) cTGGCTACCAGCTGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGa < 1:1201176/71‑1 (MQ=255) cTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAAt > 1:491229/1‑63 (MQ=255) cTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCgg < 1:395110/70‑1 (MQ=255) cTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCgg < 1:1877641/70‑1 (MQ=255) cTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGa < 1:1292912/71‑1 (MQ=255) tACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGc > 1:1748643/1‑71 (MQ=255) tACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGc > 1:145756/1‑71 (MQ=255) aGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTaa < 1:1194815/53‑1 (MQ=255) aGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag < 1:3436771/71‑1 (MQ=255) ggggCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:2268366/3‑70 (MQ=255) gCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:2518797/1‑70 (MQ=255) gCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:2202382/1‑70 (MQ=255) gCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:837811/1‑70 (MQ=255) gCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:1723052/1‑70 (MQ=255) gCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTga > 1:1613787/1‑69 (MQ=255) cGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATa > 1:699206/1‑53 (MQ=255) cGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGaa < 1:1776885/71‑1 (MQ=255) ggCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGaa < 1:1647932/70‑1 (MQ=255) aatcgggtaacgatgcttgtgtcgccatggccgattGCAGGTTAATACCGCgg < 1:2394156‑M2/17‑1 (MQ=255) AATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGa > 1:1960975‑M1/1‑71 (MQ=255) tcgggtaacgatgcttgtgtcgccattgccgattGCAGGTTAATACCGCGGAt > 1:2397134‑M2/35‑53 (MQ=255) tcgggtaacgatgcttgtgtcgccatggccgattGCAGGTTAATACCGCGGAt > 1:949470‑M2/35‑53 (MQ=255) TCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAAc > 1:3259014‑M1/1‑71 (MQ=255) TCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAAc > 1:3745140‑M1/1‑71 (MQ=255) gggtaacgatgcttgtgtcgccatggccgattGCAGGTTAATACCGCGGATCAGCTGAGaa > 1:1733499‑M2/33‑61 (MQ=255) gggtaacgatgcttgtgtcgccatggccgattGCAGGTTAATACCGCGGATCAGCTGAGaa > 1:387410‑M2/33‑61 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTaa > 1:3747299/1‑35 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTaa > 1:891101/1‑35 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTaa > 1:1172320/1‑35 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTaa > 1:3067219/1‑35 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCATCt > 1:999408/1‑50 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCt > 1:795726/1‑50 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCt > 1:3479451/1‑50 (MQ=255) ggCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCt > 1:1051406/1‑50 (MQ=255) cGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGccc > 1:306676/1‑71 (MQ=255) acaAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTgag > 1:1536350/1‑47 (MQ=255) caAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGttt < 1:2033881/71‑1 (MQ=255) aGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGa < 1:54097/71‑1 (MQ=255) tCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGaaa < 1:1163815/43‑1 (MQ=255) tCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGaaa < 1:297285/43‑1 (MQ=255) tCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGa > 1:2115260/1‑70 (MQ=255) cGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCg > 1:2477365/1‑45 (MQ=255) gTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTg > 1:928919/1‑64 (MQ=255) gTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAAc < 1:314450/70‑1 (MQ=255) gTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAAc < 1:848077/70‑1 (MQ=255) ttACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGa > 1:2110419/1‑64 (MQ=255) ttACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGa > 1:2337484/1‑64 (MQ=255) tACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAAc < 1:2612361/40‑1 (MQ=255) aCCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACAt > 1:1215749/1‑69 (MQ=255) aCCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACAt > 1:2356239/1‑69 (MQ=255) aCCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACAt > 1:619611/1‑69 (MQ=255) cgattGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCg < 1:617114‑M2/66‑1 (MQ=255) gattGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCg > 1:714006‑M2/5‑70 (MQ=255) gattGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCg > 1:2497492‑M2/5‑70 (MQ=255) gCAGGTTAATACCGCGTATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCgaaga < 1:1542824/70‑1 (MQ=255) gCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCgaaga < 1:1325495/70‑1 (MQ=255) | AAGCCAACAAAAGCGTCCTGGCTACCAGCGGCAAAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGA > minE/401054‑401193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |