| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 775766 = | 40 (0.540) | 8 (0.120) | 4/92 | NT | 16.9% | intergenic (+138/+727) | icd/minE | isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor |
| ? | minE | 775793 = | 42 (0.620) | intergenic (+165/+700) | icd/minE | isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor | |||||
TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/775837‑775766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT > minE/775793‑775859 TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCA > 1:1257094/1‑71 CAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC > 1:3280358/1‑55 AAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACC < 1:983045/46‑1 AAGGAATATCTATGTGGGAGACTAGTATTAGAACTACC < 1:599775/38‑1 GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGC < 1:446836/66‑1 GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTA < 1:2174493/52‑1 GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTA < 1:3643597/52‑1 AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG < 1:1004273/51‑1 AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG < 1:1932506/51‑1 AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG < 1:4615608/51‑1 TAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGA > 1:777667/1‑51 TAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGG > 1:919908/1‑47 CCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT < 1:3896694/71‑1 ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT > 1:1290308/1‑69 ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATT > 1:1054182/1‑65 ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATT > 1:4374778/1‑65 TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/775837‑775766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT > minE/775793‑775859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |