| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2744431 = | 40 (0.540) | 6 (0.090) | 3/90 | NT | 12.9% | coding (174/315 nt) | rplX | 50S ribosomal subunit protein L24 |
| ? | minE | 2744466 = | 45 (0.680) | coding (209/315 nt) | rplX | 50S ribosomal subunit protein L24 | |||||
CACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2744504‑2744431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAGT > minE/2744466‑2744535 CACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCA < 1:4072063/71‑1CACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTC < 1:2145976/70‑1 CGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAAC < 1:3418783/71‑1 GGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAAC < 1:267918/70‑1 GCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTC < 1:3671671/62‑1 GAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCAATCTTCAATGCGGCAACCGG > 1:911516/1‑71 GAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCAATCTTCAATGCGGCAACCGG > 1:378491/1‑71 CCTGAATAGCGGCTTCTTTTTCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTG < 1:2064793/59‑1 CCTGAATAGCGGCTTCTTTTTCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTG < 1:2276964/59‑1 TGAATAGCGGCTTCTTTTTCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGAC > 1:1243862/1‑59 TGAATAGCGGCTTCTTTTTCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGAC > 1:3372107/1‑59 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAA < 1:1595607/71‑1 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGC < 1:129852/49‑1 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGC < 1:862843/49‑1 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGC < 1:2949127/49‑1 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGC < 1:2720924/49‑1 CAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGC < 1:2012742/49‑1 CGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAG < 1:3452888/71‑1 CGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAG > 1:3951688/1‑71 CGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAG > 1:2504262/1‑71 CGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACG > 1:3363348/1‑62 GTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAGT < 1:4034005/71‑1 CACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2744504‑2744431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAGT > minE/2744466‑2744535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |