| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2974790 | 67 (0.910) | 5 (0.070) | 3/94 | NT | 7.8% | coding (1186/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase |
| ? | minE | = 2974812 | 55 (0.800) | coding (1208/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase | |||||
GTGGAGATGCTCGAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2974721‑2974790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA < minE/2974812‑2974744 GTGGAGATGCTCGAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTC < 1:1629040/69‑1 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCCGCACCAGTTCCA > 1:986525/1‑71 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCCGCACCAGTTCCA > 1:3919177/1‑71 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCCGCACCAGTTCCA > 1:1504792/1‑71 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:3002051/58‑1 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:3079465/58‑1 GAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:2037341/58‑1 CAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCCGCACCAGTTCCACGCAGCGC < 1:57253/71‑1 AATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTT < 1:2336749/47‑1 AATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTT < 1:2385201/47‑1 AATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTT < 1:2728602/47‑1 TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:527649/47‑1 TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:4568391/47‑1 TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:1438262/47‑1 TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC < 1:3694966/47‑1 TCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCCGCACCAGTTCCACGCAGCGCAGGA < 1:1345465/70‑1 TCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTC > 1:929997/1‑44 TCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTC > 1:3482326/1‑44 TCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTC > 1:2576448/1‑44 TCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTC > 1:2270549/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:3580109/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:223364/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:1928957/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:1693826/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:1421924/1‑44 TCCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATC > 1:959072/1‑44 CCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA > 1:2988308/1‑71 CCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA > 1:2269859/1‑71 CCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA > 1:3809620/1‑71 CCCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA > 1:185277/1‑71 CCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGAT < 1:1151611/69‑1 CCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGA < 1:3589579/68‑1 CCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACACGCACAAATTCGATA < 1:1026998/70‑1 GTGGAGATGCTCGAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2974721‑2974790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccCGCACCAGTTCCACGCAGCGCAGGAAACGACTGTCGTAATCTTCCTCTTCAACCCGCACAAATTCGATA < minE/2974812‑2974744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |