| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 436259 = | 57 (0.770) | 73 (1.080) | 36/92 | NT | 54.8% | intergenic (‑156/‑29) | ybfF/seqA | conserved hypothetical protein/regulatory protein for replication initiation |
| ? | minE | = 2706018 | 68 (1.010) | coding (836/837 nt) | dam | DNA adenine methylase | |||||
Only 100 of 189 total aligned reads displayed.
GCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCC > minE/2705949‑2706085 | gCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAa < 1:3362968‑M2/71‑2 (MQ=255) cGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtct > 1:2049438/1‑70 (MQ=255) gTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCa < 1:1491543/71‑1 (MQ=255) tAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtctc < 1:2797223/69‑1 (MQ=255) tAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtctc < 1:1441200/69‑1 (MQ=255) tAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCa > 1:3705162/1‑70 (MQ=255) aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct < 1:2076550‑M2/69‑9 (MQ=255) aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAg > 1:4417513/1‑70 (MQ=255) aaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaa < 1:2510410‑M2/69‑11 (MQ=255) aGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagac > 1:2153042‑M2/1‑58 (MQ=255) ggACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagc < 1:4720028‑M2/61‑8 (MQ=255) gACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCgg < 1:3444668/71‑1 (MQ=255) gACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCgg < 1:4495748/71‑1 (MQ=255) cGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtctc < 1:4306404/57‑1 (MQ=255) gAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGAt > 1:305329/1‑70 (MQ=255) aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactg > 1:2879314‑M2/1‑49 (MQ=255) aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa < 1:586517/71‑1 (MQ=255) aCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattc < 1:1684694‑M2/52‑5 (MQ=255) aCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattc < 1:945495‑M2/52‑5 (MQ=255) aCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa < 1:2696490/70‑1 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat < 1:1262137‑M2/70‑26 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat < 1:4285894‑M2/70‑26 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat < 1:2258437‑M2/70‑26 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat < 1:2230922‑M2/70‑26 (MQ=255) gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat < 1:3844315‑M2/70‑26 (MQ=255) ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAg > 1:1649576/1‑71 (MQ=255) ggCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggatt < 1:3520655‑M2/68‑27 (MQ=255) gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAaata < 1:4653885/41‑1 (MQ=255) gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAATATAATTCTCAAGGAGAAGCGGATGAAACAGTa < 1:1606523/70‑1 (MQ=255) gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGt < 1:2400997/69‑1 (MQ=255) gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTa > 1:1446413/1‑70 (MQ=255) cTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtctc < 1:3227788/46‑1 (MQ=255) cTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATtctc < 1:4042729/46‑1 (MQ=255) tttGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactgga < 1:1628477‑M2/63‑25 (MQ=255) ttGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatg < 1:2439663‑M2/70‑33 (MQ=255) tGTACAAACCAGGAGTCGTTTCACCCGCGAAAAATTAattcagctaagacactgcactggattaagatga < 1:1641687‑M2/70‑34 (MQ=255) tGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatg > 1:4277197‑M2/1‑37 (MQ=255) tGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:4583927/69‑1 (MQ=255) tACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaa > 1:376198‑M2/1‑35 (MQ=255) tACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaa > 1:1021725‑M2/1‑35 (MQ=255) cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGc > 1:3485757/1‑71 (MQ=255) aaaCCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGga > 1:298091/1‑43 (MQ=255) ccAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgatt < 1:1865285‑M2/70‑42 (MQ=255) aGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattg < 1:4177831‑M2/69‑43 (MQ=255) gAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCaa < 1:3881093/71‑1 (MQ=255) aGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATg < 1:4267748/45‑1 (MQ=255) gTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAAtt < 1:1391193/71‑1 (MQ=255) tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttga < 1:4382578‑M2/71‑50 (MQ=255) tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattga > 1:3592516‑M2/1‑22 (MQ=255) tCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:1197902/54‑1 (MQ=255) tCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:2826407/54‑1 (MQ=255) gTTTCACCCGCGAAAAAATAgttcagctaagacactgcactggattaagat < 1:4335508‑M2/51‑32 (MQ=255) gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat > 1:969892‑M2/1‑20 (MQ=255) gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagat < 1:3519242‑M2/51‑32 (MQ=255) gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGAt > 1:603034/1‑55 (MQ=255) gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCt < 1:4568386/70‑1 (MQ=255) gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCt > 1:1767246/1‑70 (MQ=255) tttCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga > 1:1815812‑M2/1‑19 (MQ=255) tttCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:4543554/52‑1 (MQ=255) tttCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTg < 1:1609028/52‑1 (MQ=255) tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgat < 1:2912623‑M2/70‑54 (MQ=255) tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagt < 1:4751348‑M2/63‑47 (MQ=255) tCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGAt > 1:3129313/1‑52 (MQ=255) tCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGAt > 1:3686289/1‑52 (MQ=255) tCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCg > 1:903559/1‑71 (MQ=255) cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg > 1:3410516‑M2/1‑16 (MQ=255) cccGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAg < 1:2720019/41‑1 (MQ=255) ccGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaact < 1:2620972‑M2/71‑59 (MQ=255) cgcgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactc < 1:3823331‑M2/71‑60 (MQ=255) cgcgAAAAAATAattcagctaagacactgcactggattaagatg < 1:1932341‑M2/44‑33 (MQ=255) gcgAAAAAATAATTCTTAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGAt < 1:678012/71‑1 (MQ=255) cgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactcta > 1:4472665‑M2/1‑10 (MQ=255) cgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaa < 1:1740266‑M2/54‑45 (MQ=255) cgAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt < 1:3146105/42‑1 (MQ=255) gAAAAAATAattcagctaagacactgcagtggatt > 1:611345‑M2/1‑9 (MQ=255) gAAAAAATAattcagctaagacactgcactggatt > 1:672365‑M2/1‑9 (MQ=255) gAAAAAATAattcagctaagacactgcactggatt > 1:724732‑M2/1‑9 (MQ=255) gAAAAAATAattcagctaagacactgcactggatt > 1:3744707‑M2/1‑9 (MQ=255) gAAAAAATAattcagctaagacactgcactggatt > 1:3965990‑M2/1‑9 (MQ=255) gAAAAAATAattcagctaagacactgcactggatt > 1:2575167‑M2/1‑9 (MQ=255) gAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGAttt > 1:2166703/1‑71 (MQ=255) aaaataTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGAt > 1:4167034/1‑43 (MQ=255) aaaaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat > 1:1067068‑M2/1‑8 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:1287082/1‑41 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:1791821/1‑41 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa > 1:4549949/1‑41 (MQ=255) aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTg > 1:4240465/1‑71 (MQ=255) aaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagc > 1:3200479‑M2/1‑6 (MQ=255) aaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga < 1:819634‑M2/58‑53 (MQ=255) aaaaTAattcagctaagacactgcactggattaagatgaa < 1:480487‑M2/40‑35 (MQ=255) aaaaTAattcagctaagacactgcactggattaagatgaa < 1:3898112‑M2/40‑35 (MQ=255) aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTg > 1:3264864/1‑70 (MQ=255) aaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagct > 1:502253‑M2/1‑5 (MQ=255) aaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagct > 1:250503‑M2/1‑5 (MQ=255) aaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagc > 1:1123800‑M2/1‑5 (MQ=255) aaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat > 1:3169148‑M2/1‑5 (MQ=255) aataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagcta > 1:1024303‑M2/1‑4 (MQ=255) ataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga < 1:849986‑M2/55‑53 (MQ=255) ataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga < 1:270199‑M2/55‑53 (MQ=255) ataatTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCt > 1:3903311/1‑53 (MQ=255) | GCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCC > minE/2705949‑2706085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |