New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 800496 =80 (1.090)5 (0.080) 3/90 NT 6.9% coding (833/1419 nt) dhaH fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component
?minE 800525 = 63 (0.950)coding (804/1419 nt) dhaH fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component

TGAAGTCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTGGAGC  >  minE/800455‑800593
                                                                      |                                                                    
tGAAGTCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTa                                                                      <  1:3608365/71‑1 (MQ=255)
tGAAGTCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTa                                                                      <  1:4476256/71‑1 (MQ=255)
   aGTCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACAt                                                                   <  1:4494795/71‑1 (MQ=255)
     tCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATaa                                                                 <  1:4219932/71‑1 (MQ=255)
       aaTAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATaaaa                                                               >  1:1239309/1‑71 (MQ=255)
       aaTAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATaaaa                                                               >  1:3040622/1‑71 (MQ=255)
         tAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACt                                                             <  1:177113/71‑1 (MQ=255)
         tAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACt                                                             >  1:1671923/1‑71 (MQ=255)
         tAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACt                                                             <  1:570186/71‑1 (MQ=255)
          aGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAAc                                                              >  1:2233998/1‑69 (MQ=255)
           gCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTgg                                                           >  1:4336730/1‑71 (MQ=255)
           gCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTgg                                                           >  1:670417/1‑71 (MQ=255)
                 cGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGata                                                     <  1:1084327/71‑1 (MQ=255)
                   tAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTg                                                            <  1:1466818/62‑1 (MQ=255)
                   tAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTg                                                            <  1:48723/62‑1 (MQ=255)
                   tAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataat                                                   <  1:1915009/71‑1 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataata                                                  >  1:2055833/1‑70 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataata                                                  >  1:1578613/1‑70 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataata                                                  >  1:3370571/1‑70 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataata                                                  >  1:3506064/1‑70 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataat                                                   >  1:1602034/1‑69 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGataat                                                   >  1:790454/1‑69 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:1663319/71‑1 (MQ=255)
                     aTCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:2201660/71‑1 (MQ=255)
                      tCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:1262660/70‑1 (MQ=255)
                        gATCTTGTTCTTCTTCCAGGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAg                                              >  1:4644291/1‑71 (MQ=255)
                        gATCTTGTTCTTCTTCCACGGTCAGGGTAGATTTTGCCTGTACCGTACATaaaa                                                               >  1:3064708/1‑54 (MQ=255)
                          tCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGc                                            >  1:184713/1‑71 (MQ=255)
                           cTTGATCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATaaa                                                >  1:1824796/1‑66 (MQ=255)
                            ttGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATaa                                                                 <  1:855351/48‑1 (MQ=255)
                              gTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAgg                                             <  1:335053/66‑1 (MQ=255)
                              gTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCttt                                         <  1:1841943/70‑1 (MQ=255)
                              gTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCttt                                         <  1:1343472/70‑1 (MQ=255)
                              gTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTa                                        >  1:1338886/1‑71 (MQ=255)
                              gTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTa                                        >  1:4459731/1‑71 (MQ=255)
                               ttcttcttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGa                                                       <  1:3229445/55‑1 (MQ=255)
                               ttcttcttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGa                                                       <  1:4267234/55‑1 (MQ=255)
                               ttcttcttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGa                                                       <  1:692961/55‑1 (MQ=255)
                               ttcttcttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGa                                                       <  1:2449104/55‑1 (MQ=255)
                                tcttcttcCACGGTCAGGGTTGATTTTGCCTGTAACGTACATAAAACTGGTTGATAATAAAAGGCTTTAc                                       >  1:964518/1‑70 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTg                                                            >  1:3980927/1‑45 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGa                                   <  1:3545738/70‑1 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGa                                   <  1:221332/70‑1 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGa                                   <  1:1001157/70‑1 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGa                                   <  1:3460157/70‑1 (MQ=255)
                                    cttcCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGa                                   <  1:3338781/70‑1 (MQ=255)
                                       ccACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:431597/53‑1 (MQ=255)
                                       ccACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGaa                                  <  1:2172764/68‑1 (MQ=255)
                                        cACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACa                               <  1:3405540/70‑1 (MQ=255)
                                         ACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACt                                                             <  1:1977811‑M1/39‑1 (MQ=255)
                                         ACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATaaaa                                               <  1:1983411‑M1/53‑1 (MQ=255)
                                          cggtacaggcaaaatcaaccctgaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGc                            >  1:2384296‑M2/29‑71 (MQ=255)
                                           ggtacaggcaaaatcaaccctgaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCg                           >  1:326044‑M2/28‑71 (MQ=255)
                                           ggtacaggcaaaatcaaccctgaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCg                           >  1:366565‑M2/28‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:3709532‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:4727579‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:683449‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:4521400‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:2957727‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:286365‑M1/1‑71 (MQ=255)
                                            GTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCgg                          >  1:2307572‑M1/1‑71 (MQ=255)
                                               aGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATaaa                                                >  1:498009/1‑46 (MQ=255)
                                               aGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATaaa                                                >  1:1861841/1‑46 (MQ=255)
                                                 ggTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACgg                     <  1:4437775/71‑1 (MQ=255)
                                                  gTTGATTTTGCCTGTACCGTACATAAAACTGGTTg                                                        <  1:1177490/35‑1 (MQ=255)
                                                  gTTGATTTTGCCTGTACCGTACATAAAACTGGTTg                                                        <  1:543180/35‑1 (MQ=255)
                                                  gTTGATTTTGCCTGTACCGTACATAAAACTGGTTg                                                        <  1:814151/35‑1 (MQ=255)
                                                  gTTGATTTTGCCTGTACCGTACATAAAACTGGTTg                                                        <  1:1968690/35‑1 (MQ=255)
                                                   ttGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATaaaa                                               >  1:4354134/1‑43 (MQ=255)
                                                      aatcaaccctgaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGc                <  1:339214‑M2/55‑1 (MQ=255)
                                                       ttttGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCa               <  1:491122/71‑1 (MQ=255)
                                                       ttttGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCa               <  1:2334991/71‑1 (MQ=255)
                                                       atcaaccctgaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGc                <  1:993185‑M2/55‑1 (MQ=255)
                                                        tttGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACg                 >  1:4706826/1‑68 (MQ=255)
                                                        tttGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCa               <  1:2511747/70‑1 (MQ=255)
                                                         ttGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:2880356/35‑1 (MQ=255)
                                                         ttGCCTGTACCGTACATAAAACTGGTTGAtaataa                                                 <  1:369562/35‑1 (MQ=255)
                                                         ttGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCa               >  1:3264827/1‑69 (MQ=255)
                                                           gCCTGTACCGTACATAAAACTGGTTGATAATaaaa                                               >  1:2329782/1‑35 (MQ=255)
                                                           gCCTGTACCGTACATAAAACTGGTTGATAATaaaa                                               >  1:1669996/1‑35 (MQ=255)
                                                              tGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAg                              <  1:2324189/49‑1 (MQ=255)
                                                               gTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGt       >  1:879774/1‑71 (MQ=255)
                                                               gTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGt       >  1:1259194/1‑71 (MQ=255)
                                                                tACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAAc                                >  1:3168956/1‑45 (MQ=255)
                                                                tACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTg      >  1:2541368/1‑71 (MQ=255)
                                                                gaccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGc                <  1:4325494‑M2/55‑1 (MQ=255)
                                                                  ccgtACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTGGa    <  1:820938‑M2/67‑1 (MQ=255)
                                                                     tACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACg                 <  1:103083‑M2/54‑1 (MQ=255)
                                                                     tACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTGGAGc  >  1:1974974‑M2/2‑70 (MQ=255)
                                                                     tACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTGGAGc  >  1:1969367‑M2/2‑70 (MQ=255)
                                                                      aCATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAg                              <  1:11944/41‑1 (MQ=255)
                                                                      |                                                                    
TGAAGTCAATAGCCTGGCGTAATCGATCTTGTTCTTCTTCCACGGTCAGGGTTGATTTTGCCTGTACCGTACATAAAACTGGTTGATAATAAAAGGCTTTACCCGAAACAGGCGGAACGGGACGCAGAGTAGGTGGAGC  >  minE/800455‑800593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.