| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1073221 | 81 (1.100) | 5 (0.070) | 3/92 | NT | 6.4% | coding (598/1257 nt) | ydhQ | conserved hypothetical protein |
| ? | minE | = 1073233 | 72 (1.060) | coding (586/1257 nt) | ydhQ | conserved hypothetical protein | |||||
Only 100 of 116 total aligned reads displayed.
TCCGTCCCCAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTC > minE/1073163‑1073302 | tCCGTCCCCAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:2787729/71‑1 (MQ=255)tCCGTCCCCAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1312765/71‑1 (MQ=255) cGTCCCCAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATgg < 1:4626680‑M2/71‑3 (MQ=255) cccAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGc > 1:4063763/1‑70 (MQ=255) aGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac > 1:3092992/1‑70 (MQ=255) aCGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCag > 1:4079416/1‑71 (MQ=255) cGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCag > 1:4068387/1‑70 (MQ=255) gATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagc > 1:779592/1‑70 (MQ=255) gATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagc > 1:1393810/1‑70 (MQ=255) gATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagc > 1:4111192/1‑70 (MQ=255) aTAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagcaa < 1:607410/71‑1 (MQ=255) aTAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagcaa < 1:4015289/71‑1 (MQ=255) aTAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagc < 1:4236230/69‑1 (MQ=255) tAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCATGAATAATCTCggtggtgaagactct > 1:1561778‑M2/1‑56 (MQ=255) aaTGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagcaagc < 1:750267/70‑1 (MQ=255) aaTGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACAGAGATTATTCATGGTGCCACCagcaagc < 1:1627389/70‑1 (MQ=255) tGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1134982/52‑1 (MQ=255) tGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1390274/52‑1 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATgg < 1:3918839‑M2/52‑3 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATgg < 1:1604142‑M2/52‑3 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATgg < 1:3650228‑M2/52‑3 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATgg < 1:865838‑M2/52‑3 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGcc > 1:1314835/1‑56 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGcc > 1:2821972/1‑56 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGcc > 1:3509645/1‑56 (MQ=255) gATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACg < 1:651811/70‑1 (MQ=255) aTCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTa > 1:3091258/1‑71 (MQ=255) aTCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTa > 1:2430395/1‑71 (MQ=255) tCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGc < 1:3090055/53‑1 (MQ=255) ccATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagcaagc < 1:4541666/63‑1 (MQ=255) cATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATc < 1:2565996/70‑1 (MQ=255) aTTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCAc < 1:432504/71‑1 (MQ=255) aTTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCAc < 1:1902471/71‑1 (MQ=255) aTTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCAc < 1:3468881/71‑1 (MQ=255) ttCTCAACGATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac < 1:3209922/52‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:4470686/44‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1865276/44‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1947154/44‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCAt < 1:1415026/44‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac < 1:3567879/52‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac < 1:3040222/52‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac < 1:3924167/52‑1 (MQ=255) ttCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGccac < 1:2667975/52‑1 (MQ=255) ctcAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAAc > 1:3485665/1‑61 (MQ=255) ctcAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAAc > 1:4420498/1‑61 (MQ=255) ctcAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATc > 1:898815/1‑66 (MQ=255) ctcAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTgg > 1:950655/1‑71 (MQ=255) ctcAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTg > 1:2667968/1‑70 (MQ=255) aacaaTAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAgcaagcaa > 1:2744360/1‑57 (MQ=255) aacaaTAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAgcaagcaa > 1:2633882/1‑57 (MQ=255) caaTAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCttt < 1:4257576/70‑1 (MQ=255) aaTAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTcc < 1:1163624/71‑1 (MQ=255) tAGTGTCAGAGTCTTCACCACCGAGATTATTCATg < 1:313607‑M2/35‑2 (MQ=255) tAGTGTCAGAGTCTTCACCACCGAGATTATTCATg < 1:2298172‑M2/35‑2 (MQ=255) tAGTGTCAGAGTCTTCACCACCGAGATTATTCATg < 1:2357570‑M2/35‑2 (MQ=255) tAGTGTCAGAGTCTTCACCACCGAGATTATTCATg < 1:388614‑M2/35‑2 (MQ=255) gtgtCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGc > 1:4360148/1‑71 (MQ=255) tCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAg > 1:1590496/1‑71 (MQ=255) cAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCagcaa < 1:660627/42‑1 (MQ=255) agagTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCa < 1:1704206/71‑1 (MQ=255) agTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCt > 1:3256481/1‑56 (MQ=255) agTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCAt > 1:1860038/1‑70 (MQ=255) agTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCAt > 1:2326065/1‑70 (MQ=255) agTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCAt > 1:3304102/1‑70 (MQ=255) agTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCAt > 1:3553100/1‑70 (MQ=255) tCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATaaa < 1:860179/71‑1 (MQ=255) tCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATaaa < 1:304114/71‑1 (MQ=255) tCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATaaa < 1:4068265/71‑1 (MQ=255) tCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATaaa < 1:2180415/71‑1 (MQ=255) accaccGAGATTATTCATggtggtgaagactctgacactattgttgagaatggatccatttatcgtctggg > 1:3561138‑M2/1‑18 (MQ=255) ccaccGAGATTATTCATggtggtgaagactctgacactattgttgagaatggatccatttatcgtctggg < 1:1267254‑M2/70‑54 (MQ=255) ccaccGAGATTATTCATggtggtgaagactctgacactattgttgagaatggatccatttatcgtctggg < 1:2092080‑M2/70‑54 (MQ=255) ccaccGAGATTATTCATggtggtgaagactctgacactattgttgagaatggatccatttatcgtctggg < 1:2632875‑M2/70‑54 (MQ=255) ccaccGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCAc > 1:4275069/1‑43 (MQ=255) ccaccGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCAc > 1:1491947/1‑43 (MQ=255) ccaccGAGAATATTCATGGTGCCACCAGCAAGCAACGTATCAc > 1:4202969/1‑43 (MQ=255) caccGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAAcgccg > 1:851885/1‑71 (MQ=255) accGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAAcgccgc < 1:2648589/71‑1 (MQ=255) accGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAAcgccgc < 1:2736392/71‑1 (MQ=255) gagaTTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCt < 1:3221741/71‑1 (MQ=255) gagaTTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCt < 1:2052366/71‑1 (MQ=255) agaTTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTccc > 1:1264990/1‑47 (MQ=255) gaTTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGa < 1:4746001/71‑1 (MQ=255) attattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCg < 1:1258706/46‑1 (MQ=255) attattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCg < 1:1208093/46‑1 (MQ=255) attattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCg < 1:2217/46‑1 (MQ=255) attattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCg < 1:3639913/46‑1 (MQ=255) attattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCg < 1:2852337/46‑1 (MQ=255) ttattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTcc > 1:4078850/1‑43 (MQ=255) ttattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTcc > 1:732826/1‑43 (MQ=255) tattCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGAtt > 1:4045118/1‑70 (MQ=255) attCATGGTGCCACCAGCAAGCAACGTATCACTGGCtt > 1:2771527/1‑38 (MQ=255) attCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGc > 1:1728966/1‑49 (MQ=255) attCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGc > 1:2114623/1‑49 (MQ=255) attCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGc > 1:3799882/1‑49 (MQ=255) attCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGc > 1:294504/1‑49 (MQ=255) attCATGGTGCCA‑CAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGc > 1:122200/1‑48 (MQ=255) cATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAAtct > 1:3895560/1‑71 (MQ=255) cATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAAtc > 1:417500/1‑70 (MQ=255) aTGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATaaaaa > 1:926285/1‑52 (MQ=255) | TCCGTCCCCAGACGATAAATGGATCCATTCTCAACAATAGTGTCAGAGTCTTCACCACCGAGATTATTCATGGTGCCACCAGCAAGCAACGTATCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTC > minE/1073163‑1073302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |