| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 95427 = | 70 (1.350) | 4 (0.090) | 3/92 | NT | 6.4% | coding (2409/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon |
| ? | minE | 95453 = | 53 (1.130) | coding (2435/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon | |||||
TGCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/95500‑95427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTG > minE/95453‑95521 TGCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT > 1:3503678/1‑71 GCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGTAAACATGGAGAACGATTCACGT < 1:2398123/70‑1 GCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTT > 1:3624447/1‑71 GCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT < 1:2632180/70‑1 TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTT < 1:2807283/70‑1 CAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:461040/1‑70 TTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT < 1:432390/45‑1 GCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:3279562/1‑35 GCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:3318209/1‑35 GCAAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTT > 1:1017851/1‑46 GGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGA < 1:1309665/40‑1 GGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGA < 1:966503/40‑1 AGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGTAGTTATCA < 1:2831424/53‑1 TTTGCAGCGATGCTGGAGTCGTTGAAATATTAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGC > 1:615596/1‑70 TTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGC < 1:1094281/70‑1 TTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTA < 1:1038101/37‑1 TTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCT > 1:1379029/1‑71 TGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAG > 1:1342569/1‑58 GCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTG < 1:3814205/70‑1 GCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTG < 1:2931367/70‑1 TGCTCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/95500‑95427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTG > minE/95453‑95521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |