| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 202882 = | NA (NA) | 7 (0.140) | 3/100 | NT | NA | noncoding (287/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | 202909 = | NA (NA) | noncoding (314/1542 nt) | rrsH | 16S ribosomal RNA | |||||
CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/202952‑202882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA > minE/202909‑202978 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:3394386/71‑1CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:3189828/71‑1 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:1556708/70‑1 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA > 1:3412385/1‑67 TCTGGACCGTGTCTCAGCTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:3577777/52‑1 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGCCCAGCTA > 1:732774/1‑43 AGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA > 1:2214400/1‑37 TGGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAG < 1:746567/68‑1 TGGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAG < 1:3901504/68‑1 GCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACG < 1:1352640/43‑1 GCTGGTCATCCTCTCAGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAG < 1:811403/66‑1 TGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG > 1:1372172/1‑67 GGTCATCCTCTCAGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGG > 1:889684/1‑56 GGTCATCCTCTCAGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGG > 1:194914/1‑56 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA < 1:306096/71‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA < 1:501340/71‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA < 1:608153/71‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA < 1:1445628/71‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:2896436/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:2562924/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:2273038/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:1934510/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:1930300/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGG > 1:3215888/1‑65 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGG > 1:2142627/1‑65 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCAC < 1:2118220/60‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGA < 1:1082163/51‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCA > 1:287047/1‑44 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/202952‑202882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAA > minE/202909‑202978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |