| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 203199 | NA (NA) | 4 (0.090) | 4/88 | NT | NA | noncoding (604/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 203228 | NA (NA) | noncoding (633/1542 nt) | rrsH | 16S ribosomal RNA | |||||
GGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203124‑203199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAG < minE/203228‑203159 GGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTC < 1:447052/71‑1 GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA < 1:2619872/71‑1 GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA < 1:2385157/71‑1 GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA < 1:1532564/71‑1 GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGT > 1:1750120/1‑69 TAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAG < 1:179729/71‑1 TAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAG < 1:232942/71‑1 TAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAG < 1:3358193/71‑1 TAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAG < 1:1456480/71‑1 TAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGT > 1:3661065/1‑68 AATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAG < 1:3345617/70‑1 ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:1765194/71‑1 ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:3204224/71‑1 ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:209393/71‑1 ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT > 1:3386976/1‑71 ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGA > 1:2523468/1‑70 TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG < 1:1481373/71‑1 TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG < 1:2015830/71‑1 ACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:2737966/69‑1 ACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:2742660/69‑1 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGT < 1:952267/54‑1 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG < 1:931795/59‑1 GTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGA > 1:2117418/1‑53 TTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:709715/53‑1 TTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGAT < 1:2440144/53‑1 AATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA > 1:370999/1‑48 TCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG < 1:2148295/50‑1 GGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGT > 1:995765/1‑42 TTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA < 1:1301506/40‑1 TTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTC < 1:3462587/39‑1 TTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTC < 1:3802046/39‑1 GCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGCAGTTCCCAGGTTGAGCCC > 1:1264381/1‑56 AAGCGCACGCAGGCGGTTTGTTAAGTCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCT < 1:724829/66‑1 ACGCAGGCGGTTTGTTAAGTCAGATGCAGTTCCCAGGTTGAGCCCGGGG > 1:1174708/1‑49 GCAGGCGGTTTGTTAAGTCAGATGTAGTTCCCAGGTTGAGCCCGGGGATTTC > 1:904361/1‑52 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTAC > 1:1379969/1‑71 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTAC > 1:3843212/1‑71 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTAC > 1:1385885/1‑71 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTA < 1:2078694/70‑1 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGC < 1:66800/66‑1 TCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGC > 1:828866/1‑60 CAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCT < 1:814741/66‑1 AGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGC < 1:2372584/71‑1 AGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCT > 1:3261187/1‑65 AGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAA > 1:2122369/1‑46 GATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC < 1:2229179/71‑1 GATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAA < 1:1565991/48‑1 GATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACA < 1:3867105/47‑1 GATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTA < 1:15048/44‑1 ATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCC < 1:2847092/71‑1 ATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:2417053/1‑70 ATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCT < 1:794676/54‑1 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCA < 1:750400/71‑1 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:1882763/1‑69 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:3783768/1‑69 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:358750/1‑69 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:2129236/1‑69 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC > 1:3139590/1‑69 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAA > 1:355719/1‑47 TGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAA > 1:2418173/1‑47 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAG > 1:111641/1‑71 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAG > 1:335652/1‑71 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAG > 1:2455989/1‑71 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTA < 1:2177463/64‑1 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCG < 1:385547/59‑1 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTT > 1:2545382/1‑40 GCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGAATTAACAAACCGCCTGCGTGCGCTTTACGCCCAG > 1:1237104/1‑71 GGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203124‑203199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAG < minE/203228‑203159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |