| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 203909 | NA (NA) | 5 (0.110) | 5/88 | NT | NA | noncoding (1314/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 203917 | NA (NA) | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA | |||||
Only 100 of 121 total aligned reads displayed.
AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCTC < minE/203917‑203848 AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:2222392/71‑1AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:1165263/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1580438/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1065808/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:433695/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:1558502/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3629198/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2919555/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:321154/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2456783/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:3032528/1‑71 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2708021/71‑1 ATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:1584319/70‑1 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:3545130/1‑70 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:2372254/1‑70 TGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:2190745/1‑70 GGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:1854403/1‑69 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG > 1:1041951/1‑71 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG < 1:3916137/71‑1 GCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAG‑AGACCTCATAAAGTGCGTAGTAGTCCGGATTGGAGT < 1:53436/71‑1 CGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:1873930/1‑71 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC > 1:2851495/1‑71 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:299284/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:3111587/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:837134/71‑1 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:1042470/1‑68 GCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2535887/66‑1 CATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:1206743/1‑65 CATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2996725/65‑1 ATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAG > 1:772403/1‑67 ATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:2866767/1‑66 ATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:518329/63‑1 ACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:1612510/64‑1 AAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC > 1:901097/1‑65 AGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:3909786/1‑60 AGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:3716664/1‑60 GAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3486854/57‑1 AGAAGCGACCTCGCCAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:2195076/56‑1 GAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCGAGTTGCAGAC > 1:3299170/1‑71 AGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT > 1:614509/1‑52 GCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCCTCGTAGTCCGGATTGGA < 1:1931487/54‑1 CGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3427743/51‑1 GACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:55012/1‑50 GACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:2223239/1‑50 ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3257041/49‑1 CTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:2480892/49‑1 CTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG > 1:1190190/1‑47 TCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:2412667/48‑1 TCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:1328279/45‑1 CGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:1177276/1‑49 CGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT > 1:319289/1‑44 GCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:2826743/1‑46 CGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA < 1:1283689/45‑1 GAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:2283176/1‑46 GAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGT > 1:2345718/1‑46 AGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT > 1:3590841/1‑38 CAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT < 1:1567355/36‑1 AGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTG < 1:3261543/35‑1 CGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCGAGTTGCAGA > 1:132813/1‑48 CGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGA > 1:111244/1‑35 GGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC < 1:3161243/37‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG < 1:2560045/71‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG < 1:1220548/71‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:852182/1‑71 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:1768975/1‑71 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC > 1:1514392/1‑70 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC > 1:684960/1‑70 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCC < 1:733899/52‑1 TGGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTC > 1:2722774/1‑51 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:3922249/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC > 1:708996/1‑71 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCG > 1:3570136/1‑70 GGAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATG < 1:196390/45‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:2051752/1‑71 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT > 1:1400685/1‑71 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGC < 1:724104/70‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:2539518/68‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTC < 1:3328050/68‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCG < 1:2004751/63‑1 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTC > 1:1134722/1‑60 GAGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGT < 1:1997840/48‑1 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTT < 1:2617521/71‑1 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTT < 1:345831/71‑1 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTT < 1:3110925/71‑1 AGTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAG > 1:3941700/1‑64 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTC > 1:536681/1‑71 GTCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTC < 1:598706/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:3004482/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:3652896/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:3646509/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT < 1:1840516/71‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCT > 1:3477798/1‑71 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTC < 1:870153/70‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCT < 1:2928681/68‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGC < 1:548695/59‑1 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTT < 1:3502372/38‑1 TCGAGTTGCAGACTACAATCCGGACTACGACGCACTTT < 1:3768639/38‑1 TCGAGTAGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAG > 1:507326/1‑62 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAG < 1:650418/61‑1 CGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCC < 1:3460473/46‑1 AATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203833‑203909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagtcGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCGAGGTCGCTTCTC < minE/203917‑203848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |