| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 204033 = | NA (NA) | 4 (0.080) | 4/94 | NT | NA | noncoding (1438/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | 204063 = | NA (NA) | noncoding (1468/1542 nt) | rrsH | 16S ribosomal RNA | |||||
CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/204106‑204033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCT > minE/204063‑204132 CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:1734228/71‑1CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:1690322/71‑1CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:1627248/71‑1CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:3718233/71‑1CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:419371/71‑1 GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:464302/71‑1 GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:190576/71‑1 GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:1226533/71‑1 GTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC < 1:3473047/71‑1 GTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC < 1:3676705/71‑1 GTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC < 1:3422762/71‑1 GTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:3007211/1‑71 TTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC < 1:352201/71‑1 TTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC < 1:2029159/71‑1 TTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC > 1:1592216/1‑71 TTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC < 1:1065341/71‑1 TTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:260520/1‑70 CCTTGTTACGACTTCACCCCACTCATCAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:1580584/65‑1 CTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:3228050/1‑66 CTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:3678733/1‑66 CTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:3026113/1‑66 CTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:1546368/1‑66 TTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:1944810/1‑65 TGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA > 1:2809968/1‑63 ACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA > 1:3915384/1‑59 GACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC < 1:3208391/58‑1 GACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA > 1:1102955/1‑57 CCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:2197621/1‑51 CCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:2506878/47‑1 AGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:2329525/45‑1 GTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA > 1:2491162/1‑45 ATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:528278/42‑1 ATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:2804061/42‑1 TGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC < 1:926980/43‑1 AATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTAC > 1:1591374/1‑40 ATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCACTTTGTGATTCATGACTGGGGTGAAGTCG > 1:2084407/1‑70 TCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTA < 1:1291503/37‑1 TCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT > 1:3461887/1‑36 TCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCT < 1:3714084/36‑1 ACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC > 1:3027770/1‑37 ACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC > 1:3904956/1‑37 TGGTAAGCGCCCTCCCGAAGGTTAAGCTACCACTTTGTGATTCATGACTGGGGTGAAG < 1:3526676/58‑1 GCGCCCTCCCGAAGGTTAAGCTACCACTTTGTGAT < 1:1716133/35‑1 GTTAAGCTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGT < 1:1260689/71‑1 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA > 1:1927774/1‑71 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAAC > 1:3645099/1‑57 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAAC > 1:115739/1‑57 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAG > 1:604767/1‑51 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAG > 1:3563810/1‑41 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAA > 1:1375083/1‑40 TACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACA < 1:3676950/39‑1 TACCACTTTGTGATTCATGAATGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAAC > 1:1889828/1‑57 ACCACTTTGTGATTCATGACTTGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGG > 1:985198/1‑66 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC > 1:1855042/1‑71 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC > 1:1961373/1‑71 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC > 1:1310007/1‑71 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC > 1:2186508/1‑71 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA < 1:2846152/70‑1 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCA < 1:2122151/70‑1 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC < 1:3869615/69‑1 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC < 1:393620/69‑1 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGG > 1:3679686/1‑66 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGG > 1:2207146/1‑66 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGC > 1:2286834/1‑60 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA > 1:2112503/1‑49 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACAGTAGGGGAACCTGCGGT > 1:2241291/1‑63 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACA > 1:2191753/1‑38 ACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAAAAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC > 1:3496184/1‑71 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCtt < 1:1765505/47‑3 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACC < 1:2560080/71‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACC > 1:980998/1‑71 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACC > 1:3397847/1‑71 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACC > 1:3211119/1‑71 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC < 1:3563386/70‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCAC < 1:1579110/70‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTT < 1:326952/63‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA < 1:1007651/48‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGCTAACCGT < 1:1364651/47‑1 CCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAG > 1:895921/1‑39 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCT > 1:2629496/1‑71 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACC < 1:3669279/70‑1 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTG > 1:109027/1‑63 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGG < 1:2586652/60‑1 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAAACTGCGGTTGGATCACCT > 1:3549770/1‑71 CACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA > 1:1345732/1‑47 CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/204106‑204033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCT > minE/204063‑204132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |