| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 205640 = | NA (NA) | 7 (0.140) | 3/96 | NT | NA | noncoding (1057/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | minE | 205665 = | NA (NA) | noncoding (1082/2904 nt) | rrlH | 23S ribosomal RNA | |||||
CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/205711‑205640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA > minE/205665‑205734 CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:2083847/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:1111800/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:856029/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:2559379/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3400085/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3274773/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:564313/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:2005161/1‑70 TTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:2353437/1‑71 TTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:2031549/1‑71 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT < 1:435378/69‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT < 1:729360/69‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA < 1:3724368/68‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:1626054/67‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:1529259/67‑1 ACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3255288/1‑56 TCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3311894/1‑54 GACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:349028/51‑1 TTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT < 1:237873/40‑1 ATGATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTCGA > 1:637331/1‑55 GATGGCTGCTTCTAAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:3485648/1‑67 GATGGCTGCTTCTAAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:3008945/1‑67 GATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:478237/1‑67 GATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:711686/1‑67 GATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCT > 1:1150803/1‑43 GATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGT < 1:2263972/36‑1 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:2065458/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:3670024/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:146183/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGC < 1:977559/39‑1 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGT > 1:572955/1‑35 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGT > 1:3397140/1‑35 CATTTAAAGAAAGCGTAATAGCTAACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:541597/1‑71 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:299224/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:3879343/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:2296667/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:1683834/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAAC < 1:2693500/66‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTA < 1:1771631/63‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTA < 1:896666/63‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAAC < 1:586034/56‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTA > 1:2006407/1‑54 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT > 1:673099/1‑53 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGA < 1:1928135/50‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:2165247/1‑46 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:1969467/46‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGC > 1:3501955/1‑44 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGC > 1:3014543/1‑44 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCC > 1:3907652/1‑39 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTC > 1:125329/1‑35 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTC > 1:1176818/1‑35 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTC > 1:1924210/1‑35 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTC > 1:2340933/1‑35 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTC > 1:258775/1‑35 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA > 1:377538/1‑71 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA < 1:1188586/71‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA < 1:3260496/71‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCA < 1:1355032/67‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTA < 1:2794074/62‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:551299/45‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:2532584/45‑1 CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/205711‑205640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA > minE/205665‑205734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |