| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 208968 = | 48 (0.930) | 7 (0.150) | 3/90 | NT | 15.0% | coding (738/915 nt) | yafC | predicted DNA‑binding transcriptional regulator |
| ? | minE | 208993 = | 37 (0.810) | coding (713/915 nt) | yafC | predicted DNA‑binding transcriptional regulator | |||||
TAGTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/209043‑208968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaaaCACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCG > minE/208993‑209058 TAGTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCG < 1:1129079/71‑1 GTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGA > 1:187035/1‑70 TGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACA < 1:1074201/71‑1 GGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACA > 1:1288020/1‑68 ACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAA > 1:976001/1‑64 GAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAA > 1:2978604/1‑61 CTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAA < 1:3207886/53‑1 TTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGA > 1:1289020/1‑49 TTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGA > 1:3491186/1‑49 CGGGATTGCGTGTTTGTCCGACTACATGATCGACAA < 1:2544087/36‑1 TTGTCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTT < 1:884273/58‑1 TTGTCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTT < 1:1199533/58‑1 TCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCA < 1:405604/58‑1 TCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCA < 1:2468610/47‑1 TCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCA < 1:259951/47‑1 TCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCA < 1:2924593/47‑1 TCCGACTACATGATCGACAAACACGCAATCCCGTTGCCACTCAGGCA < 1:3536595/47‑1 GACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTT < 1:1593353/41‑1 ACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCG > 1:2688715/1‑71 ACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTC > 1:2821290/1‑45 TAGTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/209043‑208968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaaaCACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCG > minE/208993‑209058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |