New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 298441 = | 35 (0.680) | 3 (0.070) +AACCACC |
3/88 | NT | 10.4% | coding (1102/1773 nt) | mdlA | fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily |
? | minE | 706827 = | 25 (0.480) | coding (584/921 nt) | lpxL | lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
TTTGCCGGAACCAGTCGGCCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/298464‑298441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCACTTCGCCTTTTTT > minE/706827‑706843 ||||||| TTTGCCGGAACCAGACGGGCCGCAAACCACCACCACTTCGCCTTTTT < 1:455899/47‑1 TTGCCGGAACCAGACGGGCCGCAAACCACCACCACTTCGCCTTTTTT > 1:3004006/1‑47 CAGACGGGCCGCAAACCACCACCACTTCGCCTTTTTT < 1:1929028/37‑1 ||||||| TTTGCCGGAACCAGTCGGCCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/298464‑298441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCACTTCGCCTTTTTT > minE/706827‑706843 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |