| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 370029 | 64 (1.240) | 3 (0.070) +TTAATG |
3/90 | NT | 5.5% | coding (976/3882 nt) | entF | enterobactin synthase multienzyme complex component, ATP‑dependent |
| ? | minE | = 555160 | 53 (1.020) | coding (602/663 nt) | fsaA | fructose‑6‑phosphate aldolase 1 | |||||
CGTCGTCATCAACGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/370014‑370029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAACCGCCGGATAGCTA < minE/555160‑555143 |||||| CGTCGTCATCAACGTTTTAATGTCATCCGCCGGATAG < 1:3946120/37‑1 TCGTCATCAACGTTTTAATGTCATCCGCCGGATAGCTA < 1:2651055/38‑1 TCGTCATCAACGTTTTAATGTCATCCGCCGGATAGCT > 1:3235044/1‑37 |||||| CGTCGTCATCAACGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/370014‑370029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAACCGCCGGATAGCTA < minE/555160‑555143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |