New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 391534	40 (0.770)	4 (0.090)	3/88	NT	9.4%	intergenic (‑68/+79)	ybdN/ybdO	conserved hypothetical protein/predicted DNA‑binding transcriptional regulator
	?	minE	= 391543	43 (0.960)					intergenic (‑77/+70)	ybdN/ybdO	conserved hypothetical protein/predicted DNA‑binding transcriptional regulator

CGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/391474‑391534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacactCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGA  <  minE/391543‑391479                                                                                                                                CGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTCTGCTTTACA                                                         <  1:418293/71‑1       CTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACA                                                                     <  1:2232368/53‑1        TGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTCTGCTTTACAGTGTTTA                                                  >  1:1355547/1‑71               TACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTCTGCTTTACAGTGTTTA                                                  >  1:2920476/1‑64                                     GTCTGTTAATTATAAAGTAAACACTCTGCTTTACA                                                         <  1:1105652/35‑1                                                       AAACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAG   <  1:3735086/71‑1                                                       AAACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTC                          <  1:1010698/48‑1                                                        AACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTTAGA  <  1:3396948/71‑1                                                        AACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGA  <  1:2830594/71‑1                                                        AACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGA  <  1:3600164/71‑1                                                                                                                                CGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/391474‑391534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacactCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGA  <  minE/391543‑391479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.