| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 815317 = | 52 (1.000) | 3 (0.060) | 3/94 | NT | 5.9% | coding (398/624 nt) | lolB | chaperone for lipoproteins |
| ? | minE | 815343 = | 48 (1.010) | coding (372/624 nt) | lolB | chaperone for lipoproteins | |||||
AAAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/815390‑815317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaTTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGT > minE/815343‑815410 AAAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCT > 1:3572513/1‑71 AAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTC < 1:2582330/71‑1 GTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA > 1:1544597/1‑70 GTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA > 1:487949/1‑70 CAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA > 1:2132647/1‑68 CGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA < 1:2644423/65‑1 GAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA > 1:1520739/1‑44 AATTGACCGGAATGCCAATTCCGCTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCT < 1:3204036/69‑1 TTGACCGGAATGCCAATTCCGCTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGA > 1:2877056/1‑69 TGACCGGAATGCCAATTCCGCTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACG < 1:3091670/64‑1 TCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACG > 1:1329959/1‑71 CAATATGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGT > 1:2014676/1‑71 AATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGT < 1:3605282/55‑1 AATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGAC < 1:1587327/46‑1 AATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGAC < 1:1710028/46‑1 AAAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/815390‑815317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaTTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGT > minE/815343‑815410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |