| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 855033 | 41 (0.790) | 3 (0.070) | 3/86 | NT | 8.0% | intergenic (‑44/+337) | yciG/trpA | hypothetical protein/tryptophan synthase, alpha subunit |
| ? | minE | = 855042 | 34 (0.780) | intergenic (‑53/+328) | yciG/trpA | hypothetical protein/tryptophan synthase, alpha subunit | |||||
GAAATTTCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/854957‑855033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgagtgtCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACATGGCCGAACATCG < minE/855042‑854976 GAAATTTCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATAT < 1:1410567/71‑1 ATTTCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAG > 1:1462175/1‑71 ATTTCCTGAAACACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATA > 1:1006848/1‑67 TCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT > 1:3036615/1‑71 TCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT > 1:2741028/1‑71 TCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTG < 1:1990745/70‑1 TCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTG < 1:2100337/70‑1 CCTGAACCACCACGATGTTCGGCCATTTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT < 1:3393579/70‑1 CCTGAACCACCACGATGTTCGGCCATTTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT < 1:2274150/70‑1 GAACCACCACGATGTTCGGCCATCTTATTTCTCCCGATGCGTTGCATTGTTTCATTAATATGA > 1:1414332/1‑63 CGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGTCGACACACAACAC < 1:1958507/71‑1 ATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGA > 1:2741362/1‑52 ATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGA > 1:2736752/1‑52 TTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGTCGACACACAACACTCAT < 1:268368/70‑1 CCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGTCGACACACAACACTCATATTAAT < 1:3728704/71‑1 CCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTG < 1:750184/47‑1 TGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTG < 1:1979168/44‑1 TGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTG < 1:1974380/44‑1 TTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATA > 1:2469096/1‑36 ATTTCTCCCGTTGCGTTGCATTGTTTCATTAATAT > 1:2685294/1‑35 ATTTCTCCCGTTGCGTTGCATTGTTTCATTAATAT > 1:3061228/1‑35 ATGAGTGTCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACATGGCCGA < 1:2354386/69‑1 TGAGTGTCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACATGGCCGAACA > 1:2886946/1‑71 TGAGTGTCGACACACAACACTCATATTAATGAAAAAATGCAACGCAACGGGAGAAATAACATGGCCGAACA > 1:1916717/1‑71 GTGTCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACATGGCCGAACATCG < 1:21552/71‑1 TGTCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAAT < 1:2488491/53‑1 TGTCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAAT < 1:3219972/53‑1 TCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACA > 1:2309493/1‑55 GAAATTTCCTGAACCACCACGATGTTCGGCCATGTTATTTCTCCCGTTGCGTTGCATTGTTTCATTAATATGAGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/854957‑855033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgagtgtCGACACACAACACTCATATTAATGAAACAATGCAACGCAACGGGAGAAATAACATGGCCGAACATCG < minE/855042‑854976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |