New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 901743 = | 54 (1.040) | 3 (0.070) | 3/88 | NT | 6.6% | coding (1588/1680 nt) | ycjM | predicted glucosyltransferase |
? | minE | 901773 = | 38 (0.850) | coding (1618/1680 nt) | ycjM | predicted glucosyltransferase |
ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/901819‑901743 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattagtGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA > minE/901773‑901836 ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAG < 1:20173/71‑1 CGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGAT < 1:1174676/61‑1 GTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTA < 1:1286107/57‑1 GTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTA < 1:1341149/57‑1 TTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGAT < 1:3472217/50‑1 ACTTCACTAATCAGATCCCGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCG > 1:2507901/1‑70 TAATCAGATCCCGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACG < 1:381660/58‑1 ATCAGATCCAGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCT > 1:1022345/1‑58 ATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA < 1:3518465/70‑1 TTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCC > 1:2108613/1‑44 TTAGTGAAGTTGATATATTGGGTAATGAAATAACGC > 1:1971463/1‑36 GTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGT > 1:3906747/1‑49 ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/901819‑901743 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattagtGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA > minE/901773‑901836 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |