New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 901743 =54 (1.040)3 (0.070) 3/88 NT 6.6% coding (1588/1680 nt) ycjM predicted glucosyltransferase
?minE 901773 = 38 (0.850)coding (1618/1680 nt) ycjM predicted glucosyltransferase

ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/901819‑901743
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattagtGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA  >  minE/901773‑901836
                                                                                                                                             
ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAG                                                                        <  1:20173/71‑1
            CGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGAT                                                                      <  1:1174676/61‑1
                  GTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTA                                                                    <  1:1286107/57‑1
                  GTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTA                                                                    <  1:1341149/57‑1
                       TTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGAT                                                                      <  1:3472217/50‑1
                                          ACTTCACTAATCAGATCCCGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCG                               >  1:2507901/1‑70
                                                 TAATCAGATCCCGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACG                                    <  1:381660/58‑1
                                                   ATCAGATCCAGACCATGCAGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCT                                  >  1:1022345/1‑58
                                                                       ATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA  <  1:3518465/70‑1
                                                                        TTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCC                           >  1:2108613/1‑44
                                                                        TTAGTGAAGTTGATATATTGGGTAATGAAATAACGC                                   >  1:1971463/1‑36
                                                                           GTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGT                   >  1:3906747/1‑49
                                                                                                                                             
ACCTGCCAGGGGCGCAGCGTTATTTCATTACCCAATATATCAACTTCACTAATCAGATCCCGACCATGCAGATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/901819‑901743
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattagtGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAAA  >  minE/901773‑901836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.