| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1168581 | 61 (1.180) | 4 (0.080) | 3/96 | NT | 7.2% | coding (514/621 nt) | ynjF | predicted phosphatidyl transferase, inner membrane protein |
| ? | minE | = 1168598 | 46 (0.940) | coding (497/621 nt) | ynjF | predicted phosphatidyl transferase, inner membrane protein | |||||
ACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1168510‑1168581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGA < minE/1168598‑1168530 ACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATG < 1:1747477/71‑1 CTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATG > 1:3815736/1‑70 CCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCAT > 1:2550216/1‑61 GTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGC > 1:1602726/1‑53 CGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCTGGGATGTTTATTCCCTGCA > 1:2534635/1‑71 CGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCTGGGATGTGTATTCCCTGCA > 1:3593533/1‑71 CATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCTGGGATGTTTATTCCCTGCA < 1:3391900/68‑1 CACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCTGGGATGTTTATTCCCTGCATGGTTTGC > 1:2389079/1‑69 GCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGA > 1:1653467/1‑71 GCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCG > 1:1914134/1‑50 CTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGG < 1:1267374/42‑1 CTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGG < 1:3258739/42‑1 ACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1168510‑1168581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGA < minE/1168598‑1168530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |