| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1687685 | 34 (0.660) | 33 (0.830) +GATTCTTGCGCC |
18/78 | NT | 52.2% | intergenic (‑66/+76) | sseB/pepB | rhodanase‑like enzyme, sulfur transfer from thiosulfate/aminopeptidase B |
| ? | minE | 2892324 = | 45 (0.870) | intergenic (+22/‑118) | ytfQ/ytfR | predicted sugar transporter subunit/predicted sugar transporter subunit | |||||
GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1687647‑1687685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTG > minE/2892324‑2892368 |||||||||||| gtgGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACATATTCTTGCGCCATTCGTAGGCCGGATAAGGC > 1:1537681/4‑71gtgGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGAT < 1:2557604/63‑1 tgaCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGC > 1:2898407/4‑70 aCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCT < 1:2909514/41‑1 GCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGtt > 1:250992/1‑69 CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTC < 1:1854170/71‑1 CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTA > 1:3572100/1‑54 CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGtcc < 1:3576853/71‑4 AAATGCCTGATGCGCTACGCTTATCAGGCCTTCAGATTCTTGCGCCATTCGTAGGCCGGATAAG > 1:1007612/1‑64 AAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGtt < 1:2376689/69‑3 AAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCa > 1:115877/1‑70 AAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCa > 1:2739671/1‑70 TGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCG < 1:1858988/48‑1 TGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCG < 1:220638/48‑1 TGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCG < 1:2982146/48‑1 TGCCTGATGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCC > 1:212568/1‑71 TGCCTGATGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCC > 1:3638845/1‑71 TGCCTGATGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCG > 1:3347542/1‑47 GCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTTGAGCCATTCGTAGGCCGGATAAGGCGTTCACGC > 1:434558/1‑70 CCTGATGCGCTACGCTTATCAGGCCTACAGATTCTT > 1:3788339/1‑36 CCTGATGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCC < 1:1742409/69‑1 CTGATGCGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGC < 1:2768907/71‑1 GATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCAT > 1:3424724/1‑71 GATGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATA < 1:3200186/53‑1 ATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATC > 1:1698281/1‑71 ATGCGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATC > 1:1417802/1‑71 ATGCGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCATC < 1:3367228/71‑1 TGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCG > 1:1593977/1‑71 TGCGCTACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTA > 1:1545194/1‑42 CGCTACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCG < 1:2959088/70‑1 CGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGG < 1:2360872/71‑1 CTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCa < 1:1879157/71‑2 TACGCTTATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCat > 1:2696707/1‑69 TACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCag > 1:1085164/1‑69 TACGCTTATCAGGCCTACA‑ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAT > 1:1709259/1‑71 CGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCag < 1:2136661/69‑3 TTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTCCACGCCGCA > 1:3110272/1‑58 ATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTG < 1:339089/69‑1 ATCAGGCCTACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTG < 1:585171/69‑1 ACAGATTCTTGCGCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa > 1:41356/1‑53 |||||||||||| GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1687647‑1687685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTG > minE/2892324‑2892368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |