| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1761923 = | 50 (0.960) | 6 (0.130) | 3/90 | NT | 12.6% | intergenic (‑53/+132) | rrlG/gltW | 23S ribosomal RNA/tRNA‑Glu |
| ? | minE | 1761941 = | 39 (0.850) | intergenic (‑71/+114) | rrlG/gltW | 23S ribosomal RNA/tRNA‑Glu | |||||
GTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1761998‑1761923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgttcAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCT > minE/1761941‑1762008 GTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGT > 1:1678812/1‑71 TCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTT > 1:1123031/1‑71 TTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTC > 1:1327121/1‑60 AAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTT > 1:1686722/1‑47 TCAAGCTGAAAATTGAAACACTGAACAAAGAAAGTTGTT < 1:1977933/39‑1 ACACTGAACAATGAAAGTTGTTCAGTGTTTCAATTTTCAGCTa > 1:1648342/1‑42 CTGAACAATGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCA > 1:2946257/1‑70 CTGAACAATGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCA > 1:125888/1‑70 CTGAACAATGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCA > 1:2639406/1‑70 TGAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTT > 1:1129949/1‑52 AACAATGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTA > 1:3000076/1‑51 GTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:2404050/1‑43 GTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTA < 1:1559965/41‑1 GTTGTTCAGTGTTTCAATTTTAAGCTTGATCCAGATTTTTAAA > 1:2065124/1‑43 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAG > 1:2081797/1‑71 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAG < 1:804130/71‑1 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAT > 1:1947816/1‑50 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAT < 1:2800671/50‑1 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAT < 1:1203541/50‑1 TTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTA < 1:3647973/40‑1 TGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAA > 1:3021871/1‑47 TGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:958509/1‑41 GTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTC > 1:2308634/1‑71 GTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:912621/1‑40 TTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCT < 1:2683218/71‑1 TTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTC > 1:3899977/1‑70 TTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAG < 1:1371269/42‑1 CAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:314223/1‑37 CAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:497108/1‑37 CAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAA > 1:1107316/1‑37 GTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1761998‑1761923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgttcAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCT > minE/1761941‑1762008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |